External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
ClassFibroblast Publication DOI
ea251de5-c764-4f7c-add0-8141b1061faf
Homo sapiens
19'161 cells x 58'226 genes h5ad
212 MB
 Not in ASAP Details
cellxgene
sc
L5/6 NP - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
b8920ef5-7d22-497b-abca-a7a9eb76d79a
Homo sapiens
19'191 cells x 35'483 genes h5ad
787 MB
 Not in ASAP Details
cellxgene
sc
Epithelial cells collected from 30 segments across the proximal (1) to distal... Publication DOI
b6ee0939-b5b9-4e03-9d69-96fb6bf5d434
Homo sapiens
19'200 cells x 27'359 genes h5ad
431 MB
 Not in ASAP Details
cellxgene
sc
Endothelium and SMC Publication DOI
f854421b-d231-4231-9b23-fc3be7fbee45
Homo sapiens
19'317 cells x 32'375 genes h5ad
161 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the notochord Publication DOI
786753fc-05bc-49b7-b40c-62e6a6d0fc61
Danio rerio
19'325 cells x 32'031 genes h5ad
22.7 MB
 Not in ASAP Details
cellxgene
sc
Direct Exposure to SARS-CoV-2 and Cigarette Smoke Increases Infection Severit... Publication DOI
077b0429-0f47-48e0-879a-39eaae531d42
Homo sapiens
19'361 cells x 32'330 genes h5ad
114 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_10 Publication DOI
02f8bb42-0322-4906-b9ad-b92a5ce73a2d
Homo sapiens
19'421 cells x 25'530 genes h5ad
27.6 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_07 Publication DOI
3175b4f9-c2dd-43a4-972d-8c672e0a3d24
Mus musculus
19'471 cells x 19'698 genes h5ad
14.3 MB
 Not in ASAP Details
cellxgene
sc
Neuron Publication DOI
179b00d1-14f5-48ca-8bd6-3a9c7b9e9737
Mus musculus
19'508 cells x 23'838 genes h5ad
288 MB
 Not in ASAP Details
cellxgene
sc
A single-cell and spatially-resolved atlas of human breast cancers - Stromal Publication DOI
4cdd25a4-f4fa-4c13-b8a9-80cf28511d46
Homo sapiens
19'601 cells x 28'468 genes h5ad
170 MB
 Not in ASAP Details
cellxgene
sc
Retina Publication DOI
d5c67a4e-a8d9-456d-a273-fa01adb1b308
Homo sapiens
19'694 cells x 36'475 genes h5ad
179 MB
 Not in ASAP Details
cellxgene
sc
Pvalb - neocortex: Human variation study (HVS) Publication DOI
4e374783-0152-423e-bcb6-b87cc232f64d
Homo sapiens
19'711 cells x 18'736 genes h5ad
1.68 GB
 Not in ASAP Details
cellxgene
sc
Ischemia-snRNA-Spatial multi-omic map of human myocardial infarction Publication DOI
f15e263b-6544-46cb-a46e-e33ab7ce8347
Homo sapiens
19'722 cells x 20'399 genes h5ad
153 MB
 Not in ASAP Details
cellxgene
sc
Fovea - Cell Types of the Human Retina and Its Organoids at Single-Cell Resol... Publication DOI
babbf9f3-f482-45a5-ba76-c41f4c2f503e
Homo sapiens
19'768 cells x 55'446 genes h5ad
237 MB
 Not in ASAP Details
cellxgene
sc
E9.5: 201104_32 Publication DOI
31d8129f-1957-4888-8fad-69159a9e5e33
Mus musculus
19'781 cells x 27'368 genes h5ad
124 MB
 Not in ASAP Details
cellxgene
sc
Epithelial cells collected from 30 segments across the proximal (1) to distal... Publication DOI
a5ab6cde-46d4-4667-9b32-cfce54fa7a4e
Mus musculus
19'847 cells x 16'966 genes h5ad
277 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200127_08 Publication DOI
4f420bc4-b9cd-4e14-a1d2-51d76f776374
Mus musculus
19'886 cells x 20'170 genes h5ad
17.8 MB
 Not in ASAP Details
cellxgene
sc
Single cell transcriptional and chromatin accessibility profiling redefine ce... Publication DOI
9df60c57-fdf3-4e93-828e-fe9303f20438
Homo sapiens
19'985 cells x 32'383 genes h5ad
154 MB
 Not in ASAP Details
cellxgene
sc
B Cell/Plasmablast Sub_clusters of COVID-19 Immune Altas: Integration of 5 pu... Publication DOI
d9b4bc69-ed90-4f5f-99b2-61b0681ba436
Homo sapiens
20'000 cells x 23'337 genes h5ad
147 MB
 Not in ASAP Details
cellxgene
sc
Renal cell carcinoma, pre aPD1, kidney Puck_200727_13 Publication DOI
f339fe89-c99c-4f50-b76d-2ffe9d376500
Homo sapiens
20'021 cells x 23'515 genes h5ad
17 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Hypothalamus (HTH) - preoptic region of HTH - HTHpo (medial preop... Publication DOI
03d38670-1444-4001-bc53-9936e61d9b20
Homo sapiens
20'027 cells x 58'232 genes h5ad
159 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_01 Publication DOI
4dbc3399-8272-43c4-b6fd-9d7c983e62bb
Mus musculus
20'055 cells x 19'187 genes h5ad
15.3 MB
 Not in ASAP Details
cellxgene
sc
Retina Publication DOI
856c1b98-5727-49da-bf0f-151bdb8cb056
Homo sapiens
20'091 cells x 19'263 genes h5ad
52.1 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Thalamus (THM) - Subthalamic nucleus and nearby - STH Publication DOI
a5b5d1f3-dd8b-44f6-a685-15f0f741c062
Homo sapiens
20'162 cells x 58'232 genes h5ad
74.4 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_15 Publication DOI
51e353b3-c8fe-4e8c-b912-e75c9bc28a66
Homo sapiens
20'245 cells x 26'697 genes h5ad
31.1 MB
 Not in ASAP Details
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