External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
E9.5: 201104_36 Publication DOI
3d43c79a-c57e-4d63-adfc-52584912f82c
Mus musculus
23'421 cells x 27'368 genes h5ad
155 MB
 Not in ASAP Details
cellxgene
sc
Atrial cardiomyocytes — Cells of the adult human heart Publication DOI
84f1a631-910b-4fbb-9f76-d915a07316d2
Homo sapiens
23'483 cells x 32'330 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_06 Publication DOI
deb385b8-8030-42a4-af1f-aa28932c7344
Homo sapiens
23'510 cells x 25'480 genes h5ad
28.5 MB
 Not in ASAP Details
cellxgene
sc
visium UMAP - all samples Publication DOI
66025d4a-04e7-457b-b0a3-15832a669616
Homo sapiens
23'686 cells x 35'477 genes h5ad
192 MB
 Not in ASAP Details
cellxgene
sc
Neuron Publication DOI
81c79547-368d-411e-bce3-a851a819812a
Mus musculus
23'729 cells x 20'210 genes h5ad
230 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Cerebral cortex (Cx) - Perirhinal gyrus (PRG) - A35-A36 Publication DOI
dd03ce70-3243-4c96-9561-330cc461e4d7
Homo sapiens
23'732 cells x 58'232 genes h5ad
333 MB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Mast cells Publication DOI
abc8401d-d2e6-4467-9374-5579339a7365
Mus musculus
23'835 cells x 45'525 genes h5ad
231 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200104_16 Publication DOI
43600c3c-6aa4-490a-bf80-bd74a52edfa4
Homo sapiens
23'857 cells x 22'929 genes h5ad
16.8 MB
 Not in ASAP Details
cellxgene
sc
Extended - Neural cells Publication DOI
7be23e52-e357-45d6-861f-31166913104e
Homo sapiens
23'904 cells x 35'461 genes h5ad
245 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_07 Publication DOI
0d049f5a-19b1-4055-a377-011a9570032c
Homo sapiens
23'921 cells x 25'987 genes h5ad
39.7 MB
 Not in ASAP Details
cellxgene
sc
MSK SPECTRUM - Dendritic cells Publication DOI
97d9238c-1a39-4873-b0bb-963ec2d788e6
Homo sapiens
24'025 cells x 31'093 genes h5ad
183 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - AVN Publication DOI
f29ca8ac-f8c9-469c-a039-3494545d711a
Homo sapiens
24'026 cells x 32'383 genes h5ad
185 MB
 Not in ASAP Details
cellxgene
sc
Spatiotemporal analysis of human intestinal development at single-cell resolu... Publication DOI
4d2e0563-cf4a-48bd-aa7f-efc26025b53a
Homo sapiens
24'081 cells x 32'330 genes h5ad
223 MB
 Not in ASAP Details
cellxgene
sc
adult human skin cells of health and psoriasis vulgaris Publication DOI
b796f27e-e191-4f2d-b40c-e6ac58163b4e
Homo sapiens
24'126 cells x 28'082 genes h5ad
167 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Pons (Pn) - Pontine reticular formation (PnRF) - parabrachial nuc... Publication DOI
f3565fda-499a-4d20-bd92-563c09954c42
Homo sapiens
24'155 cells x 58'232 genes h5ad
225 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Spinal cord - SpC Publication DOI
090da8ea-46e8-40df-bffc-1f78e1538d27
Homo sapiens
24'190 cells x 58'232 genes h5ad
147 MB
 Not in ASAP Details
cellxgene
sc
Stromal cell diversity associated with immune evasion in human triple‐negativ... Publication DOI
68b6114f-e990-4033-bfb3-c35536633aaa
Homo sapiens
24'271 cells x 27'040 genes h5ad
189 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Epithalamus - ETH Publication DOI
93131426-0124-4ab4-a013-9dfbcd99d467
Homo sapiens
24'327 cells x 58'232 genes h5ad
306 MB
 Not in ASAP Details
cellxgene
sc
Oligodendrocytes Publication DOI
15e0ec3e-a05f-4cd8-8624-96448f5a2b58
Homo sapiens
24'342 cells x 60'305 genes h5ad
237 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior g... Publication DOI
367b55f4-d543-49aa-90e8-4765fcb8c687
Homo sapiens
24'354 cells x 58'232 genes h5ad
341 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191109_07 Publication DOI
ba79b444-a9e4-4323-8474-421dcfb0d905
Mus musculus
24'438 cells x 20'398 genes h5ad
13.8 MB
 Not in ASAP Details
cellxgene
sc
A single-cell and spatially-resolved atlas of human breast cancers - Cancer_e... Publication DOI
7357bdd2-e05b-4e87-acd9-e3a26382648b
Homo sapiens
24'489 cells x 28'468 genes h5ad
308 MB
 Not in ASAP Details
cellxgene
sc
Lung - A single-cell transcriptomic atlas characterizes ageing tissues in the... Publication DOI
0fb7916e-7a68-4a4c-a441-3ab3989f29a7
Mus musculus
24'540 cells x 17'943 genes h5ad
288 MB
 Not in ASAP Details
cellxgene
sc
A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra -... Publication DOI
e2a3c32d-71e2-4f38-b19c-dfcb8729cf46
Homo sapiens
24'544 cells x 22'489 genes h5ad
183 MB
 Not in ASAP Details
cellxgene
sc
Longitudinal single-nucleus RNA-seq atlas of myeloid cells in pediatric high-... Publication DOI
4fa18826-7415-4f0b-92fd-31fb2b60838d
Homo sapiens
24'551 cells x 19'089 genes h5ad
222 MB
 Not in ASAP Details
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