External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200104_02 Publication DOI
a5939d1c-3f1d-4931-abf2-735d82fda26c
Mus musculus
27'044 cells x 20'452 genes h5ad
19.6 MB
 Not in ASAP Details
cellxgene
sc
A total of 27,092 droplet-based single-nucleus transcriptomes profiled across... Publication DOI
595c9010-99ec-462d-b6a1-2b2fe5407871
Homo sapiens
27'092 cells x 35'469 genes h5ad
311 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - SAN Publication DOI
25681e1c-a4f6-4948-aa5f-39d1f239f182
Homo sapiens
27'108 cells x 32'383 genes h5ad
278 MB
 Not in ASAP Details
cellxgene
sc
Mouse tracheal epithelial cells at air/liquid interface for one, three, nine,... Publication DOI
2ae39b65-06f8-4dd8-891f-efc68f39a1c6
Mus musculus
27'111 cells x 30'146 genes h5ad
1.65 GB
 Not in ASAP Details
cellxgene
sc
Dissection: Thalamus (THM) - Lateral nuclear complex of thalamus (LNC) - vent... Publication DOI
a7b4f565-691d-43ea-bf4a-d2d1d52bb4b4
Homo sapiens
27'111 cells x 58'232 genes h5ad
260 MB
 Not in ASAP Details
cellxgene
sc
Tabula Sapiens - Bone_Marrow Publication DOI
4f1555bc-4664-46c3-a606-78d34dd10d92
Homo sapiens
27'112 cells x 60'606 genes h5ad
983 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_11 Publication DOI
6c0b6bbf-faf4-4612-8823-a0908d31dbc9
Mus musculus
27'173 cells x 20'265 genes h5ad
18.3 MB
 Not in ASAP Details
cellxgene
sc
fetal Publication DOI
a51c6ece-5731-4128-8c1e-5060e80c69e4
Homo sapiens
27'197 cells x 31'998 genes h5ad
336 MB
 Not in ASAP Details
cellxgene
sc
Fetal kidney dataset: full Publication DOI
d7dcfd8f-2ee7-4385-b9ac-e074c23ed190
Homo sapiens
27'197 cells x 32'088 genes h5ad
323 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Myelencephalon (medulla oblongata) (Mo) - afferent nuclei of cran... Publication DOI
07b1d7c8-5c2e-42f7-9246-26f746cd6013
Homo sapiens
27'210 cells x 58'232 genes h5ad
190 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191204_24 Publication DOI
707acde8-4e99-4e31-8da9-782ded87d136
Mus musculus
27'220 cells x 19'659 genes h5ad
11.3 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the CNS other Publication DOI
b3327332-ad36-4f5d-b9a0-7e3a55606928
Danio rerio
27'338 cells x 32'031 genes h5ad
25.5 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200104_10 Publication DOI
d4f003d4-1e87-4301-84e6-8e01a69aa426
Mus musculus
27'429 cells x 20'177 genes h5ad
14.4 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200102_09 Publication DOI
5767c838-0d36-44bb-b025-a4dfe5cdd908
Mus musculus
27'479 cells x 21'482 genes h5ad
27.4 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the endothelium Publication DOI
6672ee00-8e76-4fa9-a54b-e238273d730b
Danio rerio
27'484 cells x 32'031 genes h5ad
34.8 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the midbrain Publication DOI
dd8d88d7-c56e-4d34-bb13-ace12ae4da87
Danio rerio
27'534 cells x 32'031 genes h5ad
24.6 MB
 Not in ASAP Details
cellxgene
sc
Human Stem Cells (LIV and TH) - A cell atlas of human thymic development defi... Publication DOI
814f2c97-49e4-4a17-be26-fde3c4c57d1b
Homo sapiens
27'589 cells x 32'088 genes h5ad
445 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191204_05 Publication DOI
2214c7a9-371f-4520-a2d0-88524b80b577
Mus musculus
27'639 cells x 21'394 genes h5ad
21.3 MB
 Not in ASAP Details
cellxgene
sc
snRNA-seq of human adipose tissue - adipocytes from subcutaneous and visceral... Publication DOI
11622d58-4dfe-4a81-b3d2-c4cabbfd636a
Homo sapiens
27'665 cells x 35'477 genes h5ad
328 MB
 Not in ASAP Details
cellxgene
sc
Living donor kidney Publication DOI
0bae7ebf-eb54-46a6-be9a-3461cecefa4c
Homo sapiens
27'675 cells x 26'791 genes h5ad
453 MB
 Not in ASAP Details
hca
sc
Spatial transcriptomics of healthy and fibrotic human liver at single-cell re... Publication DOI
64809a52-f703-4aec-b3a5-eca808a971d0::b3e48131-280e-488b-8e95-4321bef2966e
Homo sapiens
27'692 cells h5ad
5.46 GB
 Not in ASAP Details
cellxgene
sc
Cutaneous melanoma, lymph node metastasis Puck_220215_13 Publication DOI
89972213-8510-49c3-a55a-01cd248ef88a
Homo sapiens
27'757 cells x 29'586 genes h5ad
27.8 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the spinal cord Publication DOI
8d739cc9-4043-40cc-92d5-7b328f2f8ae1
Danio rerio
27'772 cells x 32'031 genes h5ad
25.2 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191204_18 Publication DOI
3483835a-fdd2-4589-8de3-530e2a13ad14
Mus musculus
27'814 cells x 18'729 genes h5ad
6.94 MB
 Not in ASAP Details
cellxgene
sc
10X Visium spatial transcriptomics on tumor-normal interface tissue sections Publication DOI
eaf0c852-1dff-47ab-8de2-a33a59969a40
Homo sapiens
27'912 cells x 35'469 genes h5ad
91.3 MB
 Not in ASAP Details
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