[FCA] Blood (10x, Stringent) ASAP43 v5

337 cells D. melanogaster

Parsing

Success
2021-06-11 13:56 Wait 0:12 Run 0:13 (expected 1:21) Max. RAM 228GB (expected 2.73GB)
Parameters
Results (stored in parsing/output.loom )
Expression Matrices
cells Metadata
/col_attrs/Embedding_HVG_t_SNE 337 cells 2 rows /col_attrs/annotation_broad_extrapolated 1 cell 1 category /col_attrs/fly_genetics 1 cell 1 category /col_attrs/note 1 cell 1 category /col_attrs/tissue 1 cell 1 category /col_attrs/annotation 1 cell 1 category /col_attrs/Embedding_SCENIC_AUC_t_SNE 337 cells 2 rows /col_attrs/celda_decontx__contamination 337 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.4__default__324_ 1 cell 12 categories /col_attrs/R_annotation__ontology_id 1 cell 1 category /col_attrs/sex 1 cell 2 categories /col_attrs/age 1 cell 1 category /col_attrs/celda_decontx__clusters 1 cell 5 categories /col_attrs/batch_id 1 cell 1 category /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 10 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 10 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 11 categories /col_attrs/R_annotation 1 cell 1 category /col_attrs/R_annotation_broad 1 cell 1 category /col_attrs/CellID 337 cells 1 row /col_attrs/_Ribosomal_Content 337 cells 1 row /col_attrs/_StableID 337 cells 1 row /col_attrs/Barcode 337 cells 1 row /col_attrs/Clustering_Leiden_resolution_6.0 337 cells 1 row /col_attrs/Embedding_HVG_UMAP 337 cells 2 rows /col_attrs/log_n_genes 337 cells 1 row /col_attrs/ClusterID 1 cell 12 categories /col_attrs/celda_decontx__doublemad_predicted_outliers 1 cell 2 categories /col_attrs/n_counts 337 cells 1 row /col_attrs/annotation_broad__ontology_id 1 cell 1 category /col_attrs/dissection_lab 1 cell 1 category /col_attrs/annotation__ontology_id 1 cell 1 category /col_attrs/sample_id 1 cell 2 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 12 categories /col_attrs/leiden 1 cell 12 categories /col_attrs/Embedding_HVG_PC1_PC2 337 cells 2 rows /col_attrs/_Depth 337 cells 1 row /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/batch 1 cell 2 categories /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 12 categories /col_attrs/n_genes 337 cells 1 row /col_attrs/log_n_counts 337 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 13 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 14 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 24 categories /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/scrublet__doublet_scores 337 cells 1 row /col_attrs/Embedding_SCENIC_AUC_UMAP 337 cells 2 rows /col_attrs/percent_mito 337 cells 1 row /col_attrs/Clustering_Leiden_resolution_0.4__76_ 1 cell 8 categories /col_attrs/_Detected_Genes 337 cells 1 row /col_attrs/_Protein_Coding_Content 337 cells 1 row /col_attrs/_Mitochondrial_Content 337 cells 1 row /col_attrs/id 1 cell 2 categories /col_attrs/fca_id 1 cell 2 categories /col_attrs/annotation_broad 1 cell 1 category /col_attrs/R_annotation_broad__ontology_id 1 cell 1 category /col_attrs/annotation_broad_extrapolated__ontology_id 1 cell 1 category
Global Metadata