[FCA] All without Blood (10x, Stringent) ASAP41 v5

506,660 cells D. melanogaster

Parsing

Success
2021-06-11 14:05 Wait 0:09 Run 10:43 (expected 0:41) Max. RAM 6.0TB (expected 2.91GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/n_counts 506660 cells 1 row /col_attrs/dissection_lab 1 cell 11 categories /col_attrs/tissue 1 cell 17 categories /col_attrs/Embedding_HVG_t_SNE 506660 cells 2 rows /col_attrs/annotation_broad 1 cell 20 categories /col_attrs/celda_decontx__doublemad_predicted_outliers 1 cell 2 categories /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/Embedding_HVG_PC1_PC2 506660 cells 2 rows /col_attrs/Barcode 506660 cells 1 row /col_attrs/age 1 cell 4 categories /col_attrs/fly_genetics 1 cell 6 categories /col_attrs/scrublet__predicted_doublets 1 cell 3 categories /col_attrs/annotation 1 cell 252 categories /col_attrs/percent_mito 506660 cells 1 row /col_attrs/celda_decontx__clusters 1 cell 39 categories /col_attrs/n_genes 506660 cells 1 row /col_attrs/Clustering_Broad_Annotation 1 cell 20 categories /col_attrs/_StableID 506660 cells 1 row /col_attrs/CellID 506660 cells 1 row /col_attrs/annotation_broad_extrapolated 1 cell 17 categories /col_attrs/note 1 cell 3 categories /col_attrs/Clustering_Broad_Annotation_Extrapolated 1 cell 17 categories /col_attrs/Embedding_HVG_UMAP 506660 cells 2 rows /col_attrs/log_n_genes 506660 cells 1 row /col_attrs/scrublet__doublet_scores 506660 cells 1 row /col_attrs/sex 1 cell 3 categories /col_attrs/R_annotation__ontology_id 1 cell 180 categories /col_attrs/batch_id 1 cell 4 categories /col_attrs/celda_decontx__contamination 506660 cells 1 row /col_attrs/Clustering_Leiden_resolution_50.0 506660 cells 1 row /col_attrs/_Protein_Coding_Content 506660 cells 1 row /col_attrs/_Mitochondrial_Content 506660 cells 1 row /col_attrs/_Ribosomal_Content 506660 cells 1 row /col_attrs/_Depth 506660 cells 1 row /col_attrs/_Detected_Genes 506660 cells 1 row /col_attrs/Clustering_Leiden_resolution_12.0 1 cell 301 categories /col_attrs/Clustering_Annotation 1 cell 252 categories /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 96 categories /col_attrs/R_annotation_broad 1 cell 21 categories /col_attrs/R_annotation_broad__ontology_id 1 cell 19 categories /col_attrs/Clustering_Leiden_resolution_0.4 1 cell 56 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 202 categories /col_attrs/Clustering_Leiden_resolution_14.0 1 cell 332 categories /col_attrs/log_n_counts 506660 cells 1 row /col_attrs/Clustering_Broad_Annotation__Relaxed_ 1 cell 22 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 79 categories /col_attrs/Clustering_Annotation__Relaxed_ 1 cell 264 categories /col_attrs/batch 1 cell 61 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 153 categories /col_attrs/leiden 1 cell 111 categories /col_attrs/Clustering_Leiden_resolution_25.0 1 cell 499 categories /col_attrs/Clustering_Leiden_resolution_2.0__default__262_ 1 cell 111 categories /col_attrs/annotation_broad_extrapolated__ontology_id 1 cell 17 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 259 categories /col_attrs/Clustering_Leiden_resolution_1.6__4_ 1 cell 102 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 237 categories /col_attrs/Clustering_Leiden_resolution_20.0 1 cell 412 categories /col_attrs/Clustering_Leiden_resolution_1.0__48_ 1 cell 84 categories /col_attrs/Clustering_Leiden_resolution_16.0 1 cell 362 categories /col_attrs/Clustering_Leiden_resolution_18.0 1 cell 395 categories /col_attrs/Clustering_Leiden_resolution_1.8__3_ 1 cell 109 categories /col_attrs/ClusterID 1 cell 111 categories /col_attrs/Clustering_Leiden_resolution_1.2__83_ 1 cell 91 categories /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 64 categories /col_attrs/sample_id 1 cell 61 categories /col_attrs/id 1 cell 61 categories /col_attrs/annotation_broad__ontology_id 1 cell 20 categories /col_attrs/R_annotation 1 cell 263 categories /col_attrs/fca_id 1 cell 61 categories /col_attrs/annotation__ontology_id 1 cell 176 categories
Global Metadata