[FCA] Head (10x, Relaxed) ASAP33 v5

111,937 cells D. melanogaster

Parsing

Success
2021-06-11 14:22 Wait 0:05 Run 2:11 (expected 1:05) Max. RAM 2.43TB (expected 2.77GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
Clustering_Leiden_resolution_20.0 1 gene 111937 cells Clustering_Annotation__Stringent_ 1 gene 111937 cells Clustering_Leiden_resolution_18.0 1 gene 111937 cells Clustering_Leiden_resolution_1.2 1 gene 111937 cells Clustering_Leiden_resolution_10.0 1 gene 111937 cells Clustering_Leiden_resolution_12.0 1 gene 111937 cells Clustering_Leiden_resolution_14.0 1 gene 111937 cells annotation 1 gene 111937 cells annotation__ontology_id 1 gene 111937 cells S_annotation_broad__ontology_id 1 gene 111937 cells sample_id 1 gene 111937 cells Clustering_Leiden_resolution_1.0__default__150_ 1 gene 111937 cells Clustering_Leiden_resolution_6.0 1 gene 111937 cells S_annotation 1 gene 111937 cells S_annotation__ontology_id 1 gene 111937 cells sex 1 gene 111937 cells S_annotation_broad 1 gene 111937 cells annotation_broad 1 gene 111937 cells S_annotation_broad_extrapolated 1 gene 111937 cells annotation_broad__ontology_id 1 gene 111937 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 111937 cells n_counts 1 gene 111937 cells Embedding_HVG_t_SNE 1 gene 111937 cells fly_genetics 1 gene 111937 cells Clustering_Leiden_resolution_50.0 1 gene 111937 cells batch_id 1 gene 111937 cells id 1 gene 111937 cells tissue 1 gene 111937 cells n_genes 1 gene 111937 cells Embedding_SCENIC_AUC_UMAP 1 gene 111937 cells percent_mito 1 gene 111937 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 111937 cells leiden 1 gene 111937 cells nucleus_sorting_note 1 gene 111937 cells Clustering_Broad_Annotation 1 gene 111937 cells CellID 1 gene 111937 cells _Depth 1 gene 111937 cells _Detected_Genes 1 gene 111937 cells _Protein_Coding_Content 1 gene 111937 cells _Mitochondrial_Content 1 gene 111937 cells _Ribosomal_Content 1 gene 111937 cells _StableID 1 gene 111937 cells fca_id 1 gene 111937 cells Clustering_Broad_Annotation__Stringent_ 1 gene 111937 cells scrublet__predicted_doublets 1 gene 111937 cells scrublet__doublet_scores 1 gene 111937 cells Embedding_HVG_PC1_PC2 1 gene 111937 cells Embedding_HVG_UMAP 1 gene 111937 cells Clustering_Leiden_resolution_8.0 1 gene 111937 cells Clustering_ASAP_Leiden1.0_Clust_20 1 gene 111937 cells Clustering_Leiden_resolution_4.0 1 gene 111937 cells Clustering_Leiden_resolution_1.4__47_ 1 gene 111937 cells Clustering_ASAP 1 gene 111937 cells Clustering_Leiden_resolution_16.0 1 gene 111937 cells Clustering_cluster4_asap 1 gene 111937 cells Clustering_Leiden_resolution_1.6__4_ 1 gene 111937 cells Clustering_Annotation 1 gene 111937 cells Clustering_Leiden_resolution_2.0 1 gene 111937 cells S_annotation_broad_extrapolated__ontology_id 1 gene 111937 cells Clustering_Leiden_resolution_0.8 1 gene 111937 cells Embedding_SCENIC_AUC_t_SNE 1 gene 111937 cells Clustering_Leiden_resolution_0.6__139_ 1 gene 111937 cells batch 1 gene 111937 cells Clustering_Leiden_resolution_0.4__60_ 1 gene 111937 cells ClusterID 1 gene 111937 cells Clustering_Leiden_resolution_1.8 1 gene 111937 cells Clustering_Leiden_resolution_25.0 1 gene 111937 cells
genes Metadata
Global Metadata