[FCA] Head (10x, Relaxed) ASAP33 v5

111,937 cells D. melanogaster

Parsing

Success
2021-06-11 14:22 Wait 0:05 Run 2:11 (expected 1:05) Max. RAM 2.43TB (expected 2.77GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/Clustering_Leiden_resolution_0.6__139_ 1 cell 38 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 16 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 58 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 42 categories /col_attrs/Embedding_SCENIC_AUC_t_SNE 111937 cells 2 rows /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 54 categories /col_attrs/Clustering_Leiden_resolution_25.0 1 cell 418 categories /col_attrs/batch 1 cell 13 categories /col_attrs/Clustering_Leiden_resolution_0.4__60_ 1 cell 29 categories /col_attrs/ClusterID 1 cell 43 categories /col_attrs/Clustering_Leiden_resolution_20.0 1 cell 317 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 167 categories /col_attrs/Clustering_Leiden_resolution_12.0 1 cell 199 categories /col_attrs/Clustering_Leiden_resolution_14.0 1 cell 231 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 82 categories /col_attrs/Clustering_Leiden_resolution_18.0 1 cell 288 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 45 categories /col_attrs/annotation 1 cell 83 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 10 categories /col_attrs/sample_id 1 cell 13 categories /col_attrs/annotation__ontology_id 1 cell 80 categories /col_attrs/Clustering_Leiden_resolution_1.0__default__150_ 1 cell 43 categories /col_attrs/S_annotation__ontology_id 1 cell 79 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 111 categories /col_attrs/S_annotation 1 cell 82 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 16 categories /col_attrs/annotation_broad__ontology_id 1 cell 10 categories /col_attrs/sex 1 cell 3 categories /col_attrs/annotation_broad 1 cell 10 categories /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/id 1 cell 13 categories /col_attrs/tissue 1 cell 1 category /col_attrs/n_genes 111937 cells 1 row /col_attrs/Embedding_SCENIC_AUC_UMAP 111937 cells 2 rows /col_attrs/percent_mito 111937 cells 1 row /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 16 categories /col_attrs/leiden 1 cell 43 categories /col_attrs/nucleus_sorting_note 1 cell 1 category /col_attrs/Clustering_Broad_Annotation 1 cell 10 categories /col_attrs/CellID 111937 cells 1 row /col_attrs/_Depth 111937 cells 1 row /col_attrs/_Detected_Genes 111937 cells 1 row /col_attrs/_Protein_Coding_Content 111937 cells 1 row /col_attrs/_Mitochondrial_Content 111937 cells 1 row /col_attrs/_Ribosomal_Content 111937 cells 1 row /col_attrs/S_annotation_broad 1 cell 10 categories /col_attrs/fca_id 1 cell 13 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 10 categories /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/scrublet__doublet_scores 111937 cells 1 row /col_attrs/Embedding_HVG_PC1_PC2 111937 cells 2 rows /col_attrs/Embedding_HVG_UMAP 111937 cells 2 rows /col_attrs/Clustering_Leiden_resolution_50.0 111937 cells 1 row /col_attrs/batch_id 1 cell 2 categories /col_attrs/_StableID 111937 cells 1 row /col_attrs/n_counts 111937 cells 1 row /col_attrs/Embedding_HVG_t_SNE 111937 cells 2 rows /col_attrs/fly_genetics 1 cell 2 categories /col_attrs/Clustering_ASAP_Leiden1.0_Clust_20 1 cell 8 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 90 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 139 categories /col_attrs/Clustering_Leiden_resolution_1.4__47_ 1 cell 51 categories /col_attrs/Clustering_ASAP 1 cell 8 categories /col_attrs/Clustering_Annotation 1 cell 83 categories /col_attrs/Clustering_Leiden_resolution_1.6__4_ 1 cell 55 categories /col_attrs/Clustering_Leiden_resolution_16.0 1 cell 268 categories /col_attrs/Clustering_cluster4_asap 1 cell 9 categories
Global Metadata