[FCA] Leg (10x, Relaxed) ASAP34 v5

15,111 cells D. melanogaster

Parsing

Success
2021-06-11 14:22 Wait 0:07 Run 0:28 (expected 1:20) Max. RAM 1.72TB (expected 2.74GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/sample_id 1 cell 2 categories /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 33 categories /col_attrs/S_annotation__ontology_id 1 cell 10 categories /col_attrs/S_annotation 1 cell 10 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 7 categories /col_attrs/annotation_broad__ontology_id 1 cell 7 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 7 categories /col_attrs/scrublet__predicted_doublets 1 cell 2 categories /col_attrs/batch 1 cell 2 categories /col_attrs/Embedding_HVG_t_SNE 15111 cells 2 rows /col_attrs/Embedding_HVG_PC1_PC2 15111 cells 2 rows /col_attrs/annotation 1 cell 10 categories /col_attrs/leiden 1 cell 21 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 30 categories /col_attrs/n_genes 15111 cells 1 row /col_attrs/Embedding_SCENIC_AUC_t_SNE 15111 cells 2 rows /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 38 categories /col_attrs/sex 1 cell 2 categories /col_attrs/Clustering_Broad_Annotation 1 cell 7 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 10 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 38 categories /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 37 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 71 categories /col_attrs/dissection_lab 1 cell 1 category /col_attrs/fca_id 1 cell 2 categories /col_attrs/fly_genetics 1 cell 1 category /col_attrs/note 1 cell 1 category /col_attrs/age 1 cell 2 categories /col_attrs/Embedding_HVG_UMAP 15111 cells 2 rows /col_attrs/Embedding_SCENIC_AUC_UMAP 15111 cells 2 rows /col_attrs/percent_mito 15111 cells 1 row /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 15 categories /col_attrs/tissue 1 cell 1 category /col_attrs/batch_id 1 cell 1 category /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 25 categories /col_attrs/_StableID 15111 cells 1 row /col_attrs/CellID 15111 cells 1 row /col_attrs/_Depth 15111 cells 1 row /col_attrs/_Detected_Genes 15111 cells 1 row /col_attrs/_Protein_Coding_Content 15111 cells 1 row /col_attrs/_Mitochondrial_Content 15111 cells 1 row /col_attrs/_Ribosomal_Content 15111 cells 1 row /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/n_counts 15111 cells 1 row /col_attrs/ClusterID 1 cell 21 categories /col_attrs/Clustering_Annotation 1 cell 10 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 27 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 56 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 119 categories /col_attrs/annotation_broad 1 cell 7 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 15 categories /col_attrs/Clustering_Leiden_resolution_0.4__default__400_ 1 cell 21 categories /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 21 categories /col_attrs/annotation__ontology_id 1 cell 10 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 15 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 96 categories /col_attrs/id 1 cell 2 categories /col_attrs/scrublet__doublet_scores 1 cell 87 categories /col_attrs/S_annotation_broad 1 cell 7 categories
Global Metadata