[FCA] Malpighian tubule (10x, Relaxed) ASAP36 v5

15,477 cells D. melanogaster

Parsing

Success
2021-06-11 14:23 Wait 0:06 Run 0:33 (expected 1:21) Max. RAM 2.12TB (expected 2.74GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/n_counts 15477 cells 1 row /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 56 categories /col_attrs/Clustering_Leiden_resolution_0.6__18_ 1 cell 19 categories /col_attrs/annotation_broad 1 cell 11 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 12 categories /col_attrs/sample_id 1 cell 2 categories /col_attrs/Embedding_HVG_t_SNE 15477 cells 2 rows /col_attrs/Embedding_HVG_UMAP 15477 cells 2 rows /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/age 1 cell 1 category /col_attrs/Embedding_HVG_PC1_PC2 15477 cells 2 rows /col_attrs/tissue 1 cell 1 category /col_attrs/fca_id 1 cell 2 categories /col_attrs/S_annotation_broad 1 cell 10 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 10 categories /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/batch 1 cell 2 categories /col_attrs/Embedding_SCENIC_AUC_UMAP 15477 cells 2 rows /col_attrs/percent_mito 15477 cells 1 row /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 12 categories /col_attrs/dissection_lab 1 cell 1 category /col_attrs/fly_genetics 1 cell 1 category /col_attrs/note 1 cell 1 category /col_attrs/batch_id 1 cell 1 category /col_attrs/Clustering_Broad_Annotation 1 cell 11 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 19 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 10 categories /col_attrs/sex 1 cell 2 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 26 categories /col_attrs/n_genes 15477 cells 1 row /col_attrs/Embedding_SCENIC_AUC_t_SNE 15477 cells 2 rows /col_attrs/_StableID 15477 cells 1 row /col_attrs/CellID 15477 cells 1 row /col_attrs/_Depth 15477 cells 1 row /col_attrs/_Protein_Coding_Content 15477 cells 1 row /col_attrs/_Mitochondrial_Content 15477 cells 1 row /col_attrs/_Ribosomal_Content 15477 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 27 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 93 categories /col_attrs/Clustering_Leiden_resolution_0.4__default__380_ 1 cell 18 categories /col_attrs/id 1 cell 2 categories /col_attrs/Clustering_Leiden_resolution_0.8__2_ 1 cell 24 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 12 categories /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 32 categories /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 32 categories /col_attrs/annotation_broad__ontology_id 1 cell 10 categories /col_attrs/ClusterID 1 cell 18 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 77 categories /col_attrs/S_annotation__ontology_id 1 cell 15 categories /col_attrs/annotation__ontology_id 1 cell 15 categories /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 34 categories /col_attrs/Clustering_Annotation 1 cell 22 categories /col_attrs/_Detected_Genes 15477 cells 1 row /col_attrs/leiden 1 cell 18 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 39 categories /col_attrs/S_annotation 1 cell 19 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 117 categories /col_attrs/annotation 1 cell 22 categories /col_attrs/scrublet__doublet_scores 1 cell 171 categories
Global Metadata