[FCA] Ovary (10x, Relaxed) ASAP38 v5

35,050 cells D. melanogaster

Parsing

Success
2021-06-11 14:23 Wait 0:10 Run 0:55 (expected 1:17) Max. RAM 2.79TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/n_counts 35050 cells 1 row /col_attrs/fly_genetics 1 cell 1 category /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/dissection_lab 1 cell 1 category /col_attrs/note 1 cell 1 category /col_attrs/Embedding_HVG_UMAP 35050 cells 2 rows /col_attrs/age 1 cell 1 category /col_attrs/sample_id 1 cell 2 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 8 categories /col_attrs/scrublet__predicted_doublets 1 cell 2 categories /col_attrs/batch 1 cell 2 categories /col_attrs/Embedding_HVG_t_SNE 35050 cells 2 rows /col_attrs/fca_id 1 cell 2 categories /col_attrs/percent_mito 35050 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 37 categories /col_attrs/n_genes 35050 cells 1 row /col_attrs/id 1 cell 2 categories /col_attrs/tissue 1 cell 1 category /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 13 categories /col_attrs/leiden 1 cell 23 categories /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 37 categories /col_attrs/batch_id 1 cell 1 category /col_attrs/Clustering_Broad_Annotation 1 cell 8 categories /col_attrs/Embedding_SCENIC_AUC_t_SNE 35050 cells 2 rows /col_attrs/sex 1 cell 1 category /col_attrs/_StableID 35050 cells 1 row /col_attrs/CellID 35050 cells 1 row /col_attrs/_Detected_Genes 35050 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 32 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 109 categories /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 44 categories /col_attrs/Clustering_Leiden_resolution_0.4__default__301_ 1 cell 23 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 13 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 75 categories /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 41 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 176 categories /col_attrs/Clustering_Annotation 1 cell 23 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 23 categories /col_attrs/annotation_broad 1 cell 8 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 48 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 144 categories /col_attrs/Clustering_Leiden_resolution_0.6__99_ 1 cell 25 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 30 categories /col_attrs/Embedding_HVG_PC1_PC2 35050 cells 2 rows /col_attrs/Embedding_SCENIC_AUC_UMAP 35050 cells 2 rows /col_attrs/_Ribosomal_Content 35050 cells 1 row /col_attrs/S_annotation_broad 1 cell 8 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 8 categories /col_attrs/ClusterID 1 cell 23 categories /col_attrs/scrublet__doublet_scores 1 cell 243 categories /col_attrs/_Depth 35050 cells 1 row /col_attrs/_Protein_Coding_Content 35050 cells 1 row /col_attrs/_Mitochondrial_Content 35050 cells 1 row /col_attrs/S_annotation__ontology_id 1 cell 12 categories /col_attrs/annotation_broad__ontology_id 1 cell 8 categories /col_attrs/annotation__ontology_id 1 cell 12 categories /col_attrs/S_annotation 1 cell 23 categories /col_attrs/annotation 1 cell 23 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 13 categories
Global Metadata