[FCA] Proboscis and maxillary palps (10x, Relaxed) ASAP39 v5

28,386 cells D. melanogaster

Parsing

Success
2021-06-11 14:24 Wait 0:08 Run 0:42 (expected 1:18) Max. RAM 2.47TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
id 1 gene 28386 cells Clustering_Leiden_resolution_10.0 1 gene 28386 cells batch_id 1 gene 28386 cells batch 1 gene 28386 cells scrublet__doublet_scores 1 gene 28386 cells ClusterID 1 gene 28386 cells S_annotation_broad_extrapolated 1 gene 28386 cells annotation__ontology_id 1 gene 28386 cells annotation 1 gene 28386 cells S_annotation 1 gene 28386 cells sample_id 1 gene 28386 cells S_annotation__ontology_id 1 gene 28386 cells S_annotation_broad_extrapolated__ontology_id 1 gene 28386 cells annotation_broad__ontology_id 1 gene 28386 cells Embedding_HVG_t_SNE 1 gene 28386 cells Embedding_HVG_PC1_PC2 1 gene 28386 cells fca_id 1 gene 28386 cells annotation_broad 1 gene 28386 cells dissection_lab 1 gene 28386 cells note 1 gene 28386 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 28386 cells fly_genetics 1 gene 28386 cells age 1 gene 28386 cells _Protein_Coding_Content 1 gene 28386 cells _Mitochondrial_Content 1 gene 28386 cells Clustering_Broad_Annotation 1 gene 28386 cells n_genes 1 gene 28386 cells Embedding_SCENIC_AUC_t_SNE 1 gene 28386 cells sex 1 gene 28386 cells Embedding_HVG_UMAP 1 gene 28386 cells Embedding_SCENIC_AUC_UMAP 1 gene 28386 cells percent_mito 1 gene 28386 cells Clustering_Leiden_resolution_1.0__1_ 1 gene 28386 cells S_annotation_broad__ontology_id 1 gene 28386 cells Clustering_Annotation__Stringent_ 1 gene 28386 cells _StableID 1 gene 28386 cells CellID 1 gene 28386 cells _Depth 1 gene 28386 cells _Detected_Genes 1 gene 28386 cells Clustering_Broad_Annotation__Stringent_ 1 gene 28386 cells scrublet__predicted_doublets 1 gene 28386 cells n_counts 1 gene 28386 cells S_annotation_broad 1 gene 28386 cells tissue 1 gene 28386 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 28386 cells leiden 1 gene 28386 cells Clustering_Leiden_resolution_1.6 1 gene 28386 cells Clustering_Annotation 1 gene 28386 cells _Ribosomal_Content 1 gene 28386 cells Clustering_Leiden_resolution_1.2 1 gene 28386 cells Clustering_Leiden_resolution_4.0 1 gene 28386 cells Clustering_Leiden_resolution_0.8__1_ 1 gene 28386 cells Clustering_Leiden_resolution_6.0 1 gene 28386 cells Clustering_Leiden_resolution_8.0 1 gene 28386 cells Clustering_Leiden_resolution_0.6__105_ 1 gene 28386 cells Clustering_Leiden_resolution_1.4__1_ 1 gene 28386 cells Clustering_Leiden_resolution_1.8 1 gene 28386 cells Clustering_Leiden_resolution_0.4__default__292_ 1 gene 28386 cells Clustering_Leiden_resolution_2.0 1 gene 28386 cells
genes Metadata
Global Metadata