[FCA] Body (10x, Relaxed) ASAP23 v5

111,011 cells D. melanogaster

Parsing

Success
2021-06-11 14:25 Wait 0:12 Run 2:19 (expected 1:12) Max. RAM 4.53TB (expected 2.78GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/Clustering_Leiden_resolution_0.4__default__234_ 1 cell 31 categories /col_attrs/ClusterID 1 cell 31 categories /col_attrs/Clustering_Leiden_resolution_16.0 1 cell 226 categories /col_attrs/Clustering_Leiden_resolution_18.0 1 cell 263 categories /col_attrs/Clustering_Leiden_resolution_25.0 1 cell 364 categories /col_attrs/sample_id 1 cell 13 categories /col_attrs/annotation_broad 1 cell 18 categories /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 55 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 113 categories /col_attrs/Clustering_Leiden_resolution_20.0 1 cell 290 categories /col_attrs/Clustering_Leiden_resolution_12.0 1 cell 180 categories /col_attrs/Clustering_Leiden_resolution_50.0 111011 cells 1 row /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 18 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 18 categories /col_attrs/S_annotation 1 cell 34 categories /col_attrs/S_annotation_broad 1 cell 17 categories /col_attrs/annotation 1 cell 35 categories /col_attrs/S_annotation__ontology_id 1 cell 33 categories /col_attrs/annotation_broad__ontology_id 1 cell 15 categories /col_attrs/_StableID 111011 cells 1 row /col_attrs/annotation__ontology_id 1 cell 33 categories /col_attrs/id 1 cell 13 categories /col_attrs/CellID 111011 cells 1 row /col_attrs/_Depth 111011 cells 1 row /col_attrs/_Detected_Genes 111011 cells 1 row /col_attrs/_Protein_Coding_Content 111011 cells 1 row /col_attrs/_Mitochondrial_Content 111011 cells 1 row /col_attrs/_Ribosomal_Content 111011 cells 1 row /col_attrs/batch 1 cell 13 categories /col_attrs/Embedding_HVG_PC1_PC2 111011 cells 2 rows /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/Embedding_HVG_UMAP 111011 cells 2 rows /col_attrs/fly_genetics 1 cell 2 categories /col_attrs/tissue 1 cell 1 category /col_attrs/scrublet__doublet_scores 111011 cells 1 row /col_attrs/Embedding_SCENIC_AUC_UMAP 111011 cells 2 rows /col_attrs/Clustering_Annotation 1 cell 35 categories /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 40 categories /col_attrs/Embedding_SCENIC_AUC_t_SNE 111011 cells 2 rows /col_attrs/Embedding_HVG_t_SNE 111011 cells 2 rows /col_attrs/n_counts 111011 cells 1 row /col_attrs/fca_id 1 cell 13 categories /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 18 categories /col_attrs/Clustering_Leiden_resolution_1.6__156_ 1 cell 53 categories /col_attrs/Clustering_Broad_Annotation 1 cell 18 categories /col_attrs/percent_mito 111011 cells 1 row /col_attrs/S_annotation_broad__ontology_id 1 cell 17 categories /col_attrs/n_genes 111011 cells 1 row /col_attrs/sex 1 cell 3 categories /col_attrs/batch_id 1 cell 2 categories /col_attrs/nucleus_sorting_note 1 cell 2 categories /col_attrs/leiden 1 cell 31 categories /col_attrs/Clustering_Leiden_resolution_1.4__9_ 1 cell 50 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 59 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 17 categories /col_attrs/Clustering_Leiden_resolution_0.6__1_ 1 cell 36 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 48 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 87 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 133 categories /col_attrs/Clustering_Leiden_resolution_14.0 1 cell 204 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 156 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 43 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 34 categories
Global Metadata