[FCA] All without Blood (10x, Relaxed) ASAP22 v5

567,950 cells D. melanogaster

Parsing

Success
2021-06-11 14:27 Wait 0:15 Run 12:59 (expected 0:36) Max. RAM 8.96TB (expected 2.93GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 20 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 252 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 225 categories /col_attrs/Clustering_Leiden_resolution_16.0 1 cell 347 categories /col_attrs/leiden 1 cell 87 categories /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 50 categories /col_attrs/Clustering_Leiden_resolution_1.2__73_ 1 cell 75 categories /col_attrs/Clustering_Leiden_resolution_12.0 1 cell 278 categories /col_attrs/batch 1 cell 61 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 180 categories /col_attrs/Clustering_Leiden_resolution_1.6__default__233_ 1 cell 87 categories /col_attrs/Clustering_Leiden_resolution_4.0__43_ 1 cell 143 categories /col_attrs/Clustering_Leiden_resolution_25.0 1 cell 480 categories /col_attrs/annotation 1 cell 263 categories /col_attrs/ClusterID 1 cell 87 categories /col_attrs/Clustering_Annotation 1 cell 264 categories /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 18 categories /col_attrs/fly_genetics 1 cell 7 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 67 categories /col_attrs/Clustering_Broad_Annotation 1 cell 22 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 60 categories /col_attrs/_Depth 567950 cells 1 row /col_attrs/_Ribosomal_Content 567950 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 80 categories /col_attrs/sample_id 1 cell 61 categories /col_attrs/S_annotation 1 cell 252 categories /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 88 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 252 categories /col_attrs/Clustering_Leiden_resolution_14.0 1 cell 316 categories /col_attrs/Clustering_Leiden_resolution_20.0 1 cell 409 categories /col_attrs/id 1 cell 61 categories /col_attrs/fca_id 1 cell 61 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 20 categories /col_attrs/tissue 1 cell 17 categories /col_attrs/n_counts 567950 cells 1 row /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/age 1 cell 4 categories /col_attrs/Embedding_HVG_t_SNE 567950 cells 2 rows /col_attrs/Embedding_HVG_PC1_PC2 567950 cells 2 rows /col_attrs/annotation_broad 1 cell 21 categories /col_attrs/annotation_broad__ontology_id 1 cell 19 categories /col_attrs/annotation__ontology_id 1 cell 180 categories /col_attrs/dissection_lab 1 cell 11 categories /col_attrs/S_annotation_broad 1 cell 20 categories /col_attrs/S_annotation__ontology_id 1 cell 176 categories /col_attrs/Clustering_Leiden_resolution_0.4__2_ 1 cell 38 categories /col_attrs/Embedding_HVG_UMAP 567950 cells 2 rows /col_attrs/scrublet__doublet_scores 567950 cells 1 row /col_attrs/batch_id 1 cell 4 categories /col_attrs/sex 1 cell 3 categories /col_attrs/Clustering_Leiden_resolution_50.0 567950 cells 1 row /col_attrs/_StableID 567950 cells 1 row /col_attrs/CellID 567950 cells 1 row /col_attrs/percent_mito 567950 cells 1 row /col_attrs/_Detected_Genes 567950 cells 1 row /col_attrs/_Protein_Coding_Content 567950 cells 1 row /col_attrs/_Mitochondrial_Content 567950 cells 1 row /col_attrs/n_genes 567950 cells 1 row /col_attrs/scrublet__predicted_doublets 1 cell 3 categories /col_attrs/Clustering_Leiden_resolution_2.0__49_ 1 cell 94 categories /col_attrs/note 1 cell 3 categories /col_attrs/Clustering_Leiden_resolution_18.0 1 cell 374 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 18 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 18 categories
Global Metadata