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Release notes & changelog

Project types

Available project types and their configurations

Cell ontologies

Ontology catalogs mirrored from legacy ASAP

Cell metadata schema

Cell metadata used by ASAP to annotate single-cell datasets

Cross-references

Identifier types and external database links

Tutorials

Step-by-step guides for new users

File formats

Supported upload and export formats

FAQ

Frequently asked questions about ASAP

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Releases

Release notes & changelog

Project types

Available project types and their configurations

Cell ontologies

Ontology catalogs mirrored from legacy ASAP

Cell metadata schema

Cell metadata used by ASAP to annotate single-cell datasets

Cross-references

Identifier types and external database links

Tutorials

Step-by-step guides for new users

File formats

Supported upload and export formats

FAQ

Frequently asked questions about ASAP

Discussions

Ask questions and share ideas

Feature requests and issues

Report bugs or suggest improvements

Contact us

Reach the ASAP team by email

Rate the app

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Menu title

New project Search projects Tutorials

Info

Releases Release notes & changelog Project types Available project types and their configurations Cell ontologies Ontology catalogs mirrored from legacy ASAP Cell metadata schema Cell metadata used by ASAP to annotate single-cell datasets Cross-references Identifier types and external database links Tutorials Step-by-step guides for new users File formats Supported upload and export formats FAQ Frequently asked questions about ASAP

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Tools

MulticoreTSNE (MulticoreTSNE) Package: MulticoreTSNE
bit64 (bit64) Package: bit64
cairo (Cairo) Package: Cairo
cluster ( Silhouette Plot [cluster package]) Package: cluster
combat (ComBat [sva package]) Package: sva
datatable (data.table) Package: data.table
deseq2 (DESeq2) Package: DESeq2
devtools (devtools) Package: devtools
edger (edgeR) Package: edgeR
flexmix (flexmix) Package: flexmix
future.apply (future.apply) Package: future.apply
genefilter (genefilter) Package: genefilter
hdf5r (hdf5r) Package: hdf5r
jsonlite (jsonlite) Package: jsonlite
kernsmooth (KernSmooth) Package: KernSmooth
limma_voom (Limma / Voom) Package: limma
m3drop (M3Drop) Package: M3Drop
mast (MAST) Package: MAST
matrix (Matrix) Package: Matrix
mds (MDS [MASS Package]) Package: MASS
nlme (nlme) Package: nlme
pagoda_scde (Pagoda / SCDE) Package: scde
pam (PAM / Silhouette Plot [cluster package]) Package: cluster
plotly (Plotly) Package: plotly
r (R) Package: R
r6 (R6) Package: R6
reticulate (reticulate) Package: reticulate
rhdf5 (rhdf5) Package: rhdf5
rtsne (Rtsne) Package: Rtsne
sanon (sanon) Package: sanon
sc3 (SC3) Package: SC3
scan_upc (SCAN / UPC) Package: SCAN.UPC
scater (scater) Package: scater
sclvm (scLVM) Package: scLVM
scran (scran) Package: scran
seurat (Seurat) Package: Seurat
statmod (statmod) Package: statmod
stats (R version & default packages [stats] (K-means, PCA, Hierarchical clustering, distance, correlation)) Package: stats
xvector (XVector) Package: XVector
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