- Label
- PyDESeq2
- Package
- pydeseq2
- Title
- Differential expression analysis in Python (DESeq2 reimplementation)
- Description
- PyDESeq2 is a Python reimplementation of the DESeq2 workflow for bulk and single-cell count data. It estimates size factors and dispersions under a negative binomial model and performs Wald tests for differential expression between conditions or groups.
Muzellec B, TeleΕczuk M, Cabeli V, Andreux M. PyDESeq2: a python package for bulk RNA-seq differential expression analysis. Bioinformatics 39:btad547 (2023). doi:10.1093/bioinformatics/btad547