ASAP Logo

snRNA-seq of human optic nerve and optic nerve head - oligodendrocytes ASAP102 v8

278'040 cells H. sapiens

Categorical Metadata

43
alignment_software
2 categories
Category Best annotation Cells
Cell Ranger count v7.1.0
-
239659
Cell Ranger count v7.0.1
-
38381
assay
1 categories
Category Best annotation Cells
10x 3' v3
-
278040
assay_ontology_term_id
1 categories
Category Best annotation Cells
EFO:0009922
-
278040
author_cell_type
5 categories
Category Best annotation Cells
OLIGO_RBFOX1-hi
-
98521
OLIGO_LRRC7-hi
-
84591
OLIGO_SVEP1-hi
-
62216
OLIGO_non_specific
-
28871
OLIGO_NAV2-hi
-
3841
cell_type
1 categories
Category Best annotation Cells
oligodendrocyte
-
278040
cell_type_ontology_term_id
1 categories
Category Best annotation Cells
CL:0000128
-
278040
development_stage
45 categories
Category Best annotation Cells
69-year-old stage
-
29139
43-year-old stage
-
25201
64-year-old stage
-
19836
62-year-old stage
-
17057
81-year-old stage
-
10385
77-year-old stage
-
9806
33-year-old stage
-
8480
21-year-old stage
-
7620
72-year-old stage
-
7438
70-year-old stage
-
7116
71-year-old stage
-
6932
67-year-old stage
-
6492
27-year-old stage
-
6488
42-year-old stage
-
6483
34-year-old stage
-
6461
47-year-old stage
-
6223
61-year-old stage
-
6169
52-year-old stage
-
5828
58-year-old stage
-
5667
18-year-old stage
-
5251
32-year-old stage
-
5158
30-year-old stage
-
5113
82-year-old stage
-
4887
10-year-old stage
-
4714
60-year-old stage
-
4163
68-year-old stage
-
4118
3-year-old stage
-
4061
65-year-old stage
-
3896
63-year-old stage
-
3636
15-year-old stage
-
3274
46-year-old stage
-
3159
16-year-old stage
-
3074
75-year-old stage
-
2973
56-year-old stage
-
2918
85-year-old stage
-
2863
76-year-old stage
-
2806
17-year-old stage
-
2793
50-year-old stage
-
2554
90 year-old and over stage
-
1939
54-year-old stage
-
1775
45-year-old stage
-
1634
37-year-old stage
-
806
53-year-old stage
-
760
74-year-old stage
-
710
11-year-old stage
-
184
development_stage_ontology_term_id
45 categories
Category Best annotation Cells
HsapDv:0000163
-
29139
HsapDv:0000137
-
25201
HsapDv:0000158
-
19836
HsapDv:0000156
-
17057
HsapDv:0000207
-
10385
HsapDv:0000171
-
9806
HsapDv:0000127
-
8480
HsapDv:0000115
-
7620
HsapDv:0000166
-
7438
HsapDv:0000164
-
7116
HsapDv:0000165
-
6932
HsapDv:0000161
-
6492
HsapDv:0000121
-
6488
HsapDv:0000136
-
6483
HsapDv:0000128
-
6461
HsapDv:0000141
-
6223
HsapDv:0000155
-
6169
HsapDv:0000146
-
5828
HsapDv:0000152
-
5667
HsapDv:0000112
-
5251
HsapDv:0000126
-
5158
HsapDv:0000124
-
5113
HsapDv:0000208
-
4887
HsapDv:0000104
-
4714
HsapDv:0000154
-
4163
HsapDv:0000162
-
4118
HsapDv:0000097
-
4061
HsapDv:0000159
-
3896
HsapDv:0000157
-
3636
HsapDv:0000109
-
3274
HsapDv:0000140
-
3159
HsapDv:0000110
-
3074
HsapDv:0000169
-
2973
HsapDv:0000150
-
2918
HsapDv:0000211
-
2863
HsapDv:0000170
-
2806
HsapDv:0000111
-
2793
HsapDv:0000144
-
2554
HsapDv:0000274
-
1939
HsapDv:0000148
-
1775
HsapDv:0000139
-
1634
HsapDv:0000131
-
806
HsapDv:0000147
-
760
HsapDv:0000168
-
710
HsapDv:0000105
-
184
disease
1 categories
Category Best annotation Cells
normal
-
278040
disease_ontology_term_id
1 categories
Category Best annotation Cells
PATO:0000461
-
278040
donor_age
45 categories
Category Best annotation Cells
69 years
-
29139
43 years
-
25201
64 years
-
19836
62 years
-
17057
81 years
-
10385
77 years
-
9806
33 years
-
8480
21 years
-
7620
72 years
-
7438
70 years
-
7116
71 years
-
6932
67 years
-
6492
27 years
-
6488
42 years
-
6483
34 years
-
6461
47 years
-
6223
61 years
-
6169
52 years
-
5828
58 years
-
5667
18 years
-
5251
32 years
-
5158
30 years
-
5113
82 years
-
4887
10 years
-
4714
60 years
-
4163
68 years
-
4118
3 years
-
4061
65 years
-
3896
63 years
-
3636
15 years
-
3274
46 years
-
3159
16 years
-
3074
75 years
-
2973
56 years
-
2918
85 years
-
2863
76 years
-
2806
17 years
-
2793
50 years
-
2554
>89 years
-
1939
54 years
-
1775
45 years
-
1634
37 years
-
806
53 years
-
760
74 years
-
710
11 years
-
184
donor_cause_of_death
10 categories
Category Best annotation Cells
unknown
-
233022
Septicemia
-
11866
Metastatic Melanoma
-
11828
Colorectal Carcinoma
-
8480
Malignant Neoplasm
-
6223
Intracranial Hemorrhage
-
2664
Stroke
-
1579
Anoxia
-
1008
Multiple Organ Failure
-
710
Myocardial Infarction
-
660
donor_id
80 categories
Category Best annotation Cells
BCM_22_0784
-
19131
BCM_22_0896
-
13099
BCM_23_0231
-
10093
Hu6
-
8689
Hu14
-
8480
BCM_22_0183
-
7620
BCM_22_0047
-
7116
BCM_23_0416
-
6483
Hu0220
-
6223
BCM_22_0849
-
6181
BCM_22_0524
-
5903
MMD_19_D008
-
5888
MMD_22_32888
-
5828
MMD_22_17464
-
5389
MMD_23_16055
-
5251
BCM_22_0434
-
5158
Hu0235
-
5113
MMD_22_16608
-
4996
MMD_22_38029
-
4887
BCM_23_0358
-
4833
BCM_22_0200
-
4727
MMD_23_17738
-
4714
BCM_22_0101
-
4398
BCM_22_0890
-
4297
MMD_22_37089
-
4118
BCM_23_0578
-
4109
MMD_23_22486
-
4061
MMD_22_16860
-
3995
BCM_23_0596
-
3688
MMD_22_14307
-
3636
BCM_22_0500
-
3330
MMD_23_02177
-
3323
BCM_22_0396
-
3311
MMD_23_21623
-
3274
Hu0221
-
3168
BCM_22_0952
-
3165
BCM_23_0574
-
3159
MMD_22_25357
-
3078
BCM_22_0528
-
2973
MMD_22_18633
-
2954
BCM_23_0131
-
2935
BCM_23_0329
-
2918
BCM_22_0389
-
2889
MMD_D009_13
-
2863
MMD_23_21999
-
2793
Hu0355
-
2664
Hu0222
-
2554
BCM_23_0390
-
2520
MMD_22_37117
-
2518
BCM_22_0867
-
2356
MMD_22_21878
-
2305
Atlanta_A230245
-
1956
MMD_22_20137
-
1939
Hu11
-
1912
MMD_22_17939
-
1776
BCM_23_0622
-
1775
BCM_23_0362
-
1771
BCM_23_0224
-
1634
MMD_22_34032
-
1628
MMD_22_13066
-
1605
Hu0869
-
1579
MMD_22_33472
-
1411
MMD_22_38453
-
1343
Hu10
-
1227
BCM_23_1080
-
1081
Hu0563
-
1008
BCM_22_0563
-
806
BCM_22_0854
-
760
Hu1059
-
710
Hu0564
-
660
Hu0326
-
649
MMD_22_20357
-
418
Hu0887
-
382
BCM_23_0334
-
270
BCM_22_0769
-
184
BCM_23_0313
-
168
BCM_23_0491
-
70
MMD_23_20181
-
69
BCM_23_0792
-
67
MMD_22_20372
-
28
donor_living_at_sample_collection
1 categories
Category Best annotation Cells
False
-
278040
gene_annotation_version
1 categories
Category Best annotation Cells
v98
-
278040
globe
3 categories
Category Best annotation Cells
NotApplicable
-
146934
OD
-
85308
OS
-
45798
institute
2 categories
Category Best annotation Cells
Baylor College of Medicine
-
233022
Harvard University
-
45018
intronic_reads_counted
1 categories
Category Best annotation Cells
yes
-
278040
is_primary_data
1 categories
Category Best annotation Cells
False
-
278040
library_id
112 categories
Category Best annotation Cells
f70f2f2d-9254-4cb2-a45e-04e45f5c6b13
-
5828
6ae93f6b-21c5-4d70-ac1b-be7ef4c57831
-
5604
e242a1ee-b910-4b31-a142-7d4be5beb622
-
5579
06f93a98-3a84-4201-a33f-ca61d1891489
-
5389
25c2b205-24ba-482d-b704-79284d52de8d
-
5251
fcbe4aea-a185-4c84-8074-abbc2c2da389
-
5241
d0722cce-2ae3-45b5-88df-c392d2cd4762
-
5172
971f24c6-4a0a-47d2-8101-eaf288182c11
-
5156
0e340ab6-81b4-4916-8c0b-589f86f81b34
-
5043
f0c16526-45cd-4e63-83a7-4ca4967fe76f
-
5002
d1b6f70b-00c3-477e-a661-59fa78e5a601
-
4996
541edd8e-8ebe-4287-a2a1-1e8df4fc5278
-
4888
1670d075-1d89-4f98-8c86-cdb2ca7b5642
-
4887
4baabd44-74d7-4a43-9cb1-ce34b22b437c
-
4803
35c1d893-1d7a-4beb-90f9-ff97497af860
-
4714
a45aeb95-8037-49c3-a3c6-d370a6fa3aaf
-
4604
f5c525ad-6bae-412f-baae-345d76233db0
-
4508
88fb93ca-4d36-4a7e-94cc-73048e6e1dd3
-
4478
bba9b967-d314-43e3-9b7a-4f6e94c47a88
-
4398
6c3a4c35-022f-4ff1-8dc3-30e031b1c8d2
-
4325
2f739204-2db1-469c-a199-92a4e017c8d4
-
4211
0897b465-37ff-47a4-b2a9-12cd2e4b1d68
-
4149
db368e46-eef0-4e0d-a1c6-1d4e7f741bf0
-
4118
aa401443-f3b8-4c85-8d8d-6effb684c5d6
-
4115
d1836241-e16b-4208-baf6-cff0a5b7616a
-
4109
03173ec5-4a37-42f1-84d1-36b00a2e8f09
-
4061
4a82e63a-66a3-4d70-bd31-b36b8d3b426a
-
3995
ce39e1d9-07d8-4b00-8638-fefa8f1b50f6
-
3940
56548161-2252-49e6-9030-e0eb76063c8a
-
3897
c8c671f8-6969-468b-bac0-b67a86b0051f
-
3809
67f04e10-630b-459c-9168-beb9ef4f296d
-
3693
7978ad9d-472d-42e7-8ff6-9b42f75c49d3
-
3651
bf01292e-e317-4710-aec9-dd32a9602c0e
-
3636
856d2cf2-e5d0-4019-bc41-9eeb494e80e9
-
3552
e7dbe123-9a50-407a-8c76-04916dca24c3
-
3511
4a1dcfd7-4fa9-442d-b197-9855da19f5dc
-
3478
d1a43b6b-3d6e-4891-a63b-fe8e808da2fb
-
3471
2b570a96-b66d-452d-9ede-ef061c1e8869
-
3423
b3eb8d48-7eab-4c6b-825c-708a6c333f35
-
3323
d9a2697c-85d3-49ba-aebc-a021464b53a1
-
3311
1e76ff07-4a19-4f69-bad4-aa673a8be1f9
-
3303
8389dcf7-8539-41d2-849d-49433fe3fff8
-
3296
cdc0550c-7ad5-45bc-b4bf-85adb67187c2
-
3274
daafa1cc-3926-4493-9df7-880fd79fa993
-
3168
b7ed2771-1caa-48c9-a6e1-507fb46fa42c
-
3165
7cc74953-93e9-4790-bb63-9a1b3b9f4787
-
3151
952cb614-951c-430f-bbad-39f36be9afc1
-
3114
026cb7e3-cac4-409f-89b7-2a73c8412ddf
-
3078
2a1ae9b3-ad01-4477-9904-725c9e2f7f5b
-
2964
307f4583-f0c4-4a27-ab91-cfe7fc58e553
-
2954
99afdea8-9302-45c3-9010-f5e1ac42efef
-
2935
82303235-5eaf-4193-98e7-12e01943c7e8
-
2850
3b6ed564-9a2f-4aeb-b73a-70f5fe0a562b
-
2793
daeeb6e2-f2ab-42b3-9269-e82f0074834d
-
2586
bc6ca2e6-256e-464c-916f-e30a98ca523a
-
2554
d4da18d5-73d9-49dc-9e38-ae5fc8ea3945
-
2520
4daacbac-095a-4668-ad05-9bb0007b3284
-
2518
e3164e12-9d33-4650-9a77-0cdc8980111d
-
2356
24b2a970-937e-4f67-9f56-255d106fa7da
-
2305
e7c5e0c5-968c-4eb1-8ebc-3e5825ce3e4c
-
2256
98654cc0-a61b-44b1-a6dd-ad6745b6277a
-
2225
85e080e4-0b14-4561-acf2-21e4a54b5329
-
1939
8b0410dc-ab30-4fb0-a000-f6d0f449d7b8
-
1912
cd33249e-ee93-466a-9ccb-3d610c7d2abd
-
1898
28788816-95f7-4a7a-81a0-4d0627fa968c
-
1896
f33c6de5-8097-4d62-9c89-da6da6c6a068
-
1846
2da6175c-54f5-47b5-9f89-ddbe111e5f73
-
1776
d9db2335-d23f-4803-9190-4f0e9a1aff06
-
1775
00651266-9ac2-470f-9bed-f9a3eae7c005
-
1771
75fa5339-196a-44e2-b167-e886cceb1123
-
1653
9f66dd2c-5893-423e-9e39-329d6d319910
-
1634
219c31ea-1c21-462e-853f-c59a4890c6d9
-
1631
2d3c39e1-beff-4472-81d5-e84da90ab824
-
1628
1d951c87-6c6d-4105-a62f-6c6e63feb483
-
1605
09f66b4f-9376-462d-b27b-6280528134bc
-
1579
ab71109c-ae02-4da7-b568-4e454075e5b7
-
1411
ad3df33d-8be9-4ad9-bc18-0551ab757ffe
-
1395
64eb8c28-e681-4070-8f74-8bc779f912e6
-
1343
070e7512-5b7b-4bfc-9f05-fe7028d7ddb3
-
1232
da453ece-f7c4-4a00-97f0-c69978d84021
-
1227
9f57a987-544b-4489-87b8-3ae4d4f0ff4d
-
1173
c0d6acf5-273a-40ab-8c1f-c5d4a9afe57b
-
1081
0267d215-630c-4cae-ba11-6dd066c1b7f2
-
1072
8efd71b5-8a41-4258-8403-f929c3d96fcc
-
1008
d475f6ad-d117-4dde-8625-32a1c9ed1af7
-
994
f0c37d28-f2ba-4a67-a153-4baa904332c7
-
806
b71ed01d-35bd-481e-b017-73ec1c507ea2
-
760
4dccd759-377a-48b7-9bf2-1c6244a8ffd9
-
710
4ba2d827-4902-489d-8767-e8555c53c5b5
-
660
1f896d68-9de2-470c-8c24-93842dea4825
-
649
a79c4535-c74f-4850-8282-a81a216af674
-
445
9be6db8f-aca3-414b-bac0-6b2209e25cc9
-
418
a00cabb7-9440-4df7-ba5b-fa0d2a81a008
-
408
9ece6d42-8ff9-4def-a123-932cf1285030
-
382
212d0689-649e-40b2-bbc6-c93eea5f6bc6
-
309
926d8666-76f6-4cf3-9f46-cb9e12f8b030
-
270
68597847-21ee-47fc-9dbf-5f7a3f07bd15
-
184
7b05a7e6-d9a6-45c1-a624-f818c9f57439
-
168
6a185a8f-4cbe-4f9d-89c6-142f0d466759
-
123
9c2c41d5-faa2-4272-a44f-cc24e47a5619
-
115
51929a5d-e3cb-40a4-acaf-cfaeb1552261
-
70
21f6ecd3-5cbe-4190-981f-855a0cce0a86
-
69
669b2fe1-54ed-491e-bf8d-1ce7e05061eb
-
67
6a93203e-3bfe-4b37-9a19-45a8b9f6bbdf
-
60
efb46a2f-2476-446d-8aad-0ffd84385452
-
39
ecd38693-8c5b-462a-85eb-2b7c32d7f4de
-
37
8e65365b-c93a-4f0d-980d-fd5a14ea1068
-
34
c0db6998-212d-453d-aaf6-fad1a4faeadf
-
30
18426dc0-9ee6-4135-82f9-1310a5dbb7f8
-
28
8c3e7b7d-123e-4a65-92d4-cf391f56e0d0
-
19
dd171aa6-6c4b-44f3-bbe6-e0a27e4d1d19
-
9
e6d359b5-a499-4f8a-a805-165db8914147
-
8
library_id_repository
21 categories
Category Best annotation Cells
nan
-
233022
SRX20898898
-
5002
SRX20898913
-
4478
SRX20898894
-
4325
SRX20898900
-
4211
SRX20898897
-
3940
SRX20898899
-
3478
SRX20898895
-
3168
SRX20898896
-
2554
SRX20898893
-
2256
SRX20898912
-
1912
SRX20898909
-
1898
SRX20898905
-
1579
SRX20898911
-
1227
SRX20898910
-
1173
SRX20898903
-
1008
SRX20898907
-
710
SRX20898904
-
660
SRX20898901
-
649
SRX20898902
-
408
SRX20898906
-
382
majorclass
1 categories
Category Best annotation Cells
Oligodendrocyte
-
278040
pmit
47 categories
Category Best annotation Cells
NotApplicable
-
46974
8
-
35409
3
-
19201
7
-
13338
6
-
12785
9
-
12006
6.5
-
8037
6+
-
7268
16
-
6984
19
-
6483
9.5
-
6181
2.98
-
5888
4.32
-
5828
8.83
-
5389
18.25
-
5251
4.55
-
4996
8.02
-
4887
4
-
4833
13
-
4799
3.83
-
4118
17.8
-
4061
5.67
-
4054
5.3
-
3995
8+
-
3688
22.93
-
3274
6.03
-
3078
11
-
2973
6.0
-
2954
12
-
2918
2.87
-
2863
9.17
-
2793
5
-
2520
8.92
-
2518
2.82
-
2305
3.72
-
1939
6.28
-
1776
18
-
1775
7.52
-
1628
4.15
-
1605
6.47
-
1411
6.08
-
1343
20
-
806
10.5
-
760
10
-
184
15.03
-
69
7.5
-
67
5.18
-
28
reference_genome
1 categories
Category Best annotation Cells
GRCh38
-
278040
reported_diseases
2 categories
Category Best annotation Cells
none
-
266212
[metastatic melanoma]
-
11828
sample_collection_method
1 categories
Category Best annotation Cells
surgical resection
-
278040
sample_collection_year
5 categories
Category Best annotation Cells
unknown
-
233022
2020
-
25538
2018
-
8689
2016
-
7652
2019
-
3139
sample_id
104 categories
Category Best annotation Cells
e90acad3-ff77-47cf-b262-b5235b11bf3c
-
16017
7b93fe02-072c-40f7-bafd-fe862f725bbf
-
8965
e0fd257e-e596-4ec0-9cca-27ae273401d6
-
8440
fb33c250-b421-4331-b18f-e24dd9d330ed
-
5903
9c2c2c87-f188-43d2-a278-50c3a0a2d8a9
-
5828
bf11f4d3-3b79-4f0f-9f0d-635a4a4e3045
-
5736
38b51f8d-6b98-4955-8bc3-777a0466bb3c
-
5579
0e10d84e-5091-4251-89c8-3ab2259badcc
-
5389
f38be0de-feed-4422-b936-54b2eb71c30d
-
5251
56873f93-aaad-465d-a7e5-7b6813584a2d
-
5043
a97cb8a6-8919-4cf2-a744-409b0b15e878
-
5002
1b4216fa-453c-4613-a87a-d0ca70f49179
-
4996
c2634bc3-f2dc-46ba-9fcd-124aa4a333c4
-
4887
fca0986e-8c71-48f9-bfe7-39079addf88d
-
4803
4b40fb06-9324-4811-8e17-65bfb0b3d33e
-
4727
bd0bb71b-ebd9-48f2-87f2-5602d8622dba
-
4714
ccfa518a-259f-4538-8619-13b6330feb48
-
4478
435d22e8-2c56-4792-b0a3-8e6b5c542aba
-
4398
8ee7d24f-7154-4305-834c-10791eeb10b1
-
4325
7b63d34b-f1b0-40a1-a9c2-a2e5c12b046b
-
4211
f56cd94c-7514-4a79-8846-e450e8a311a6
-
4149
b3c18af0-3f20-49e5-adde-56d8d7dbc875
-
4134
fbf607ee-877f-420f-add5-72a79c4a495a
-
4118
0be770a6-3682-4ea0-9de6-8d0b6adb88a3
-
4109
9b9b106a-ab55-40b2-9c3a-5324b908f6da
-
4061
9b4431ef-a3ab-4c65-9b27-6f4699f204c8
-
3995
0cea71e4-77d6-4ce2-be84-68dcba70f607
-
3940
2fcc7a0f-b51a-4cb2-b926-b70f02f3363a
-
3897
e9a0ba68-3035-41c2-833b-f50d72d963ca
-
3693
98037789-7269-4d0c-b4d0-69aaaee01da0
-
3651
17def85e-48d0-4ebf-8ef6-775fdc4503ec
-
3636
d5d2d205-bedf-4ae7-8daf-eda31a85a056
-
3478
18e6a1ce-cfaf-45bb-9b97-410826ec39cd
-
3471
7e62c639-abcd-491a-9c2d-f78417db340b
-
3423
ee95c2ad-0dd9-4df7-8c4d-c30dab6de3a9
-
3323
a9e33f16-bcbe-4ff2-8305-6248d4297b42
-
3311
6a419109-a302-4dd9-ad96-b88b632c7fd3
-
3303
bb8dd90c-3fd9-44cd-b6dd-84dd2873c3c7
-
3296
b575fa81-38d7-4329-8ba2-5884f007dc05
-
3274
791b5147-6477-43d0-9d83-e1bf416cc27c
-
3168
997a4561-b069-41e7-9e85-c8581c38f12f
-
3165
c58fd612-44d7-4431-84ca-3bd013311c73
-
3151
d6bd0cbf-accd-44b6-8dbb-0880dd8f94f9
-
3114
2fb73720-0fd4-4593-98a1-275652cb71f6
-
3078
9435395d-091a-4a3b-aa31-a9a5450b3d1c
-
2964
258401ba-950d-4cbe-a41f-f777b2c3b764
-
2954
f517095c-f3dc-4599-803b-f9ccf85aed9f
-
2935
6a237bd4-8236-41df-bd01-51fe5161c9d6
-
2850
303f7777-828f-44e2-8a38-c72b3854fc66
-
2793
a9272fb4-3bc9-41b9-be58-6516e42dabfe
-
2586
199a6409-5a8d-448a-ad8e-6afbd6711d74
-
2554
fe86899f-a73d-4c1d-8741-332ae3d345c5
-
2520
af15184c-b8eb-4d03-96cc-f5cab08a7e76
-
2518
e180761e-9761-472a-ab68-ba4f74f6a5ca
-
2356
3c55f8d1-e529-460a-8cd4-de0c72168af0
-
2305
4b6a570d-48ea-4d8c-aab5-8aee0b4da110
-
2256
284cf47a-64ee-47f3-9376-0f7338e8eb35
-
1939
9f5bbd4f-c388-4f30-80bc-53dae82bc730
-
1912
d54638ab-eb5c-4ee9-8b81-b7eaf19b4ddc
-
1898
f842aa6d-a824-4eb0-8577-5d0ca1bfe05e
-
1896
7684cae2-2f45-4dc5-b727-780cb353f815
-
1846
3f1d2507-dc1a-4ccd-9843-01b5de46a696
-
1776
19725f19-bb18-4c28-a91c-ac4f1ff45e76
-
1775
1b6e0d7d-b3c7-4593-a6f3-d2ac343f8838
-
1771
089bb53b-90d0-411a-a56f-f724279be40d
-
1653
99d04f7e-630a-4177-baaf-448cf0535965
-
1634
74d0af34-212f-4c33-b940-0f39d1c3067c
-
1631
912c70b6-ac07-4c02-b219-cdc1b25e00de
-
1628
5107eef3-a3b1-4df3-906a-a09d26b4205c
-
1605
f75b47bc-8157-4c6a-98dc-673b87acdd7d
-
1579
58295ae2-ab3f-4632-ba93-f285c40407de
-
1411
2d34c172-e8ab-4126-9180-03c3227a6126
-
1343
0a4068ad-9a07-4dd5-9939-a701709287a6
-
1232
8bcdab03-cd22-4d20-88b0-2f6a9b5f2bb9
-
1227
f4d57a40-59b8-4cd5-a051-ff74c3ad4182
-
1173
386a5e2f-fae3-4534-9dfb-3366cdff2c5e
-
1081
49784b67-b56a-476f-b6fd-ff02a711ba13
-
1072
a2c8b240-afec-4daa-9ae9-cb78ba536619
-
1008
1917084a-9770-41e1-83f3-c01033b5a48c
-
994
422ca3d4-f33a-4fdc-a7a9-ded56110fd49
-
806
1710397f-22ae-4dea-9a0a-0a4f7a509983
-
760
201adc7c-5f09-44bb-ac45-17b911523572
-
710
2e8479d5-186d-488f-93f2-41bdb1cd6c89
-
660
bdad4b2d-7fa8-4e4c-9e71-7d4e0e941e66
-
649
9455c7b0-03a2-4347-ad08-f2cfa0efb245
-
445
899a2538-e46e-4d69-a04b-aa51f83ca179
-
418
322aa9f6-c316-4e98-aa0f-ed1c4902c84b
-
408
e7c795c5-9d9e-4500-8d97-ee57ce2f65d1
-
382
6318c8e2-b4ed-4afa-b736-3c33a33fe3e1
-
309
da094027-0556-47e9-be9a-535b0b81bb6b
-
270
2df83e67-efd0-4808-8c06-30f8ee9f4cd2
-
184
bd1dd29f-99d3-4612-bbc3-b851230684b4
-
168
24e72e1c-cad2-4ce2-b67c-bd1a7bc6a5aa
-
115
313276f4-beba-4962-a568-1020e0714698
-
70
509cc42a-3565-44db-bfb5-45327fe1a194
-
69
636bb717-8ea0-4292-aeed-d03b8f830fd2
-
67
91eb46cc-f75d-4af6-90e4-8f94ae7ff73f
-
60
88114a87-3f3b-4be6-80eb-708797300f80
-
39
7e167744-801c-4d88-aeb0-65a90c0375f1
-
37
e292fb5a-4d26-410a-8814-56a2baa6f268
-
34
60310c3f-a0f3-4d06-be29-7adae9c02dac
-
30
24628524-b6e7-4e6f-a993-adb97474a6d1
-
28
97972595-6b12-4b88-b559-ac2b4f69bbc4
-
9
761bd7a0-fc93-405f-9619-d8c0ae06e39b
-
8
sample_preservation_method
1 categories
Category Best annotation Cells
frozen in liquid nitrogen
-
278040
self_reported_ethnicity
7 categories
Category Best annotation Cells
African American
-
80299
European American
-
78723
Hispanic or Latin
-
57680
unknown
-
45018
Asian
-
6551
South Asian
-
5472
Indian
-
4297
self_reported_ethnicity_ontology_term_id
7 categories
Category Best annotation Cells
HANCESTRO:0568
-
80299
HANCESTRO:0590
-
78723
HANCESTRO:0612
-
57680
unknown
-
45018
HANCESTRO:0847
-
6551
HANCESTRO:0848
-
5472
HANCESTRO:0487
-
4297
sequenced_fragment
1 categories
Category Best annotation Cells
3 prime tag
-
278040
sex
2 categories
Category Best annotation Cells
male
-
173821
female
-
104219
sex_ontology_term_id
2 categories
Category Best annotation Cells
PATO:0000384
-
173821
PATO:0000383
-
104219
source
2 categories
Category Best annotation Cells
Chen
-
233022
Sanes
-
45018
suspension_derivation_process
2 categories
Category Best annotation Cells
mechanical dissociation,enzymatic dissociation
-
233022
mechanical dissociation,centrifugation
-
45018
suspension_type
1 categories
Category Best annotation Cells
nucleus
-
278040
suspension_uuid
112 categories
Category Best annotation Cells
f2655a2e-63b6-4ba9-b400-392ed2fd3370
-
5828
5f6c5dae-2fd0-4396-b84e-c4d388ae1889
-
5604
6849fb24-5ebb-4256-9985-96a355462a2c
-
5579
2e257f09-895a-4a22-8913-590c79bac718
-
5389
ff8f8a82-0bd8-4659-a40a-c24d4a4dc94a
-
5251
cec9398d-6f4c-481a-8170-a1a7e7f1497d
-
5241
d2a54f72-c063-4d83-b339-7b6f55405c2f
-
5172
ca8c049e-6226-471d-98dc-9c7d8650b754
-
5156
1f78885a-66d4-4da2-93d0-8ea3f0b1f314
-
5043
f5e5969b-4907-4d41-89e4-72baf79b983f
-
5002
de49668d-d99e-4739-a545-55cdac0c4529
-
4996
9b49047b-c519-40cd-a73c-e39fc1fcd02e
-
4888
48a23c5e-7f90-4590-98bb-2f8175d1348f
-
4887
d57929da-6525-4ab6-b611-6ed82ae8c4d3
-
4803
e7dace79-4075-4f4f-8cdd-02c7349431b6
-
4714
927e1049-1575-4e9c-83d4-6f3d2803df91
-
4604
774b1a22-ef28-4ea5-a33c-fe8beed9a8a9
-
4508
70e2bf9d-bc58-4ddd-9e86-68607496e6cb
-
4478
94510e01-0f78-4081-b7c4-cf1f06798f8b
-
4398
14803bd0-dccc-4da0-aedc-42c4a47a655d
-
4325
e4ddbe98-f4d7-41d3-8713-9f67aff2f148
-
4211
420ce58e-3f78-4a6b-9f32-bfda3cadd7ae
-
4149
be0b6e80-df6d-4123-99c8-47938b16a5a0
-
4118
f21769a7-e197-4c77-97cb-d9a605956195
-
4115
302bf48f-7f88-419f-aac6-1855027bdcdd
-
4109
2ba2290c-8ec1-4dd4-a24e-1927e13ec1ac
-
4061
8d0fdefc-e912-4d66-b311-c282066302ac
-
3995
104f68b8-30cb-4495-9cac-52d710d50bc6
-
3940
3e243062-ccfd-4009-a097-1b8ce3a11482
-
3897
c5aa0e19-b750-43d5-b15d-4703ff78d8e0
-
3809
4b104e63-101c-479e-b7cf-007dcb939a81
-
3693
1f5fb57b-ab5c-42e6-9961-5db05bd09c86
-
3651
991b379c-92aa-4c04-97a9-37313563b19e
-
3636
caa7dac8-1f22-4ec8-912b-4267d3080a59
-
3552
d569a816-3e7b-4760-8e3a-9fcd73c894a5
-
3511
3a4dd357-1bc0-416d-b1ca-3a32a150efe4
-
3478
7e4140e7-e277-47b9-a2d5-d9cbce040939
-
3471
2c9f237b-c832-4492-a4d5-f6b3a3605bd6
-
3423
82c54d31-f18a-4229-b745-885a5ce0a5ea
-
3323
857f97b5-58fd-494d-8c9f-0b6051e26759
-
3311
b90f9c09-044b-4a7a-b945-89e08ef5f3e4
-
3303
8943d4ad-46a0-4a30-866c-374323bf39b5
-
3296
16caacbe-0090-4002-a831-03a4ac5af333
-
3274
acac7c70-aba3-4c89-8591-cb606046b19c
-
3168
fa0b5e9b-cd3d-4664-ac94-614c5c460038
-
3165
c4bd55f9-1520-4906-b964-fd3698c80119
-
3151
4e3555bf-ac82-4100-b235-86bec371b622
-
3114
c8038c14-7e54-4854-886b-730edd33f93f
-
3078
6fb57a75-4ba5-4fe3-b71d-e5c28ac13fbc
-
2964
ec5a62ef-1b8d-4d99-abd7-d139294aa39c
-
2954
f1a444d6-92a0-422c-9891-99c9aba1dd70
-
2935
03fb0218-c21a-4b15-a079-0b669bb18a39
-
2850
a2bf2885-4283-4c42-bbba-3858c51dfeab
-
2793
c76484e0-fdc1-4ef9-b695-5ff3a00b93b4
-
2586
d2420d82-1987-4604-ae27-984368199b5a
-
2554
11a4ec44-6537-4cbe-a9a3-1d217715fa8e
-
2520
b49fe123-ce12-4404-8e63-ce195d49836d
-
2518
a7c40dcb-9879-4c6a-933d-1f75106d50fb
-
2356
7b384315-58f4-403a-bdcb-b3a5e8de31da
-
2305
8a27abd4-d644-4179-a446-4b2f1e7e3c87
-
2256
bb85b046-3550-42d8-9d64-7abf3f17a432
-
2225
b8c5805c-be2c-48fe-ba1a-348365301a80
-
1939
07e71aea-99b8-475a-84bd-36e20097e8b5
-
1912
7377a175-5d52-411d-b432-5551b3d5a0ff
-
1898
39647dd0-74b7-484c-be4b-96a171a3063f
-
1896
69687c19-2b8a-471b-80f8-a0f82aa0945c
-
1846
41020234-fb9e-4caa-835b-f51d39a7a0dd
-
1776
b5b7e142-b04a-40e1-8833-86de3b42a0bd
-
1775
f0c1fbd0-53ec-4c56-8ddf-2f40934ddedd
-
1771
8703073f-4b32-49ff-8ae6-ba951a3a8cb8
-
1653
c08a7540-3a8a-4247-8fb5-0a90f05c6e6b
-
1634
81ad2c85-b167-4f37-877b-6a7000dd023b
-
1631
c416710d-6795-4c11-aa3a-48334692b603
-
1628
77a86140-9f5d-4e5b-ae63-2807558d942a
-
1605
26592cf8-a249-4e82-9d96-d763687232c3
-
1579
e0aa3fca-b304-4c5c-946c-8ac51f242788
-
1411
9e0fd07b-537c-4be0-86b5-4fdb2a2af868
-
1395
a526da15-0e27-4c8b-9ae9-332703b7411d
-
1343
f0e3a55c-cce2-4e4d-9335-183f7446ebac
-
1232
9218be1b-e6f6-485b-9b88-f646f0ccc229
-
1227
da1f21b2-2982-4f46-9582-de8aa11ca51d
-
1173
0e05fa55-5c53-4de3-baf7-261b50378074
-
1081
2757cdaa-ae5e-4c76-b43e-09cf2ee75d01
-
1072
24d2acc1-02c8-4322-912c-41f7891c3db4
-
1008
d6adcf59-ebf9-4ba5-98a4-0a4b2732c170
-
994
3578f49c-bbeb-4d33-97b4-a1ccc2dcdbf6
-
806
7cc57bd7-e136-4838-9a15-54c0109535d4
-
760
2eaee8d8-bf66-4dd1-80fb-f2489717e09c
-
710
79722763-f1c4-4a51-aec4-9edb776cf316
-
660
1416dd68-907c-49a3-a5db-2fd2975e4179
-
649
3cd32f90-c2f3-44e0-9e42-721bfa93d7f5
-
445
0060058d-294d-4c2e-9781-cff69cd352bc
-
418
54a41221-9e57-4968-93c8-241d9c8610c1
-
408
0cff400f-dcc2-4915-88b6-76537fbe4834
-
382
9b104acd-cc3d-4c98-aa24-146d47bcdcd9
-
309
78382a22-6c9f-45fb-983e-c14b866e3dcb
-
270
8efbd108-03a4-4dcb-9631-d0a742bbee7b
-
184
44ce4dbc-a5f0-4bc6-80a6-c8a585d80d64
-
168
bb7fc45d-3d20-4ebe-81e6-393e974764a2
-
123
86fd8381-545f-4f1d-ae0f-3cabcec498ca
-
115
9ca2e3c3-a28d-4d22-98ac-9fcf9fb5021e
-
70
40d8d8cc-d32b-4a67-aac6-4577823aac76
-
69
928fafd5-5bcd-4c2d-bc59-60016dbde3b8
-
67
282ab444-9f3b-46a2-98d1-df12bfe54b5c
-
60
dd608d7d-8b55-4d7f-9d37-7720f36521a1
-
39
80b0380e-eea8-49af-b365-fac311fab3a4
-
37
87dbdf45-c44b-4d49-b98d-543e28179bd8
-
34
19a4d19b-bf2f-4d15-b33a-bdaefec1268e
-
30
a1d7e002-5d95-4764-b6df-2312a1276744
-
28
ef5e4578-30fa-48e9-84dc-1598c0461dae
-
19
f509e15d-33d2-43b8-8f9f-ed3f275fab48
-
9
071880fa-9aa2-4d03-a441-19d165a36bd0
-
8
tissue
2 categories
Category Best annotation Cells
cranial nerve II
-
224248
optic disc
-
53792
tissue_handling_interval
13 categories
Category Best annotation Cells
unknown
-
234249
2 hours
-
10601
4 hours
-
8480
3.5 hours
-
6223
5 hours
-
5762
2.83 hours
-
3168
3 hours
-
2664
3.92 hours
-
2554
4.67 hours
-
1579
5.42 hours
-
1008
6 hours
-
710
8.33 hours
-
660
5.75 hours
-
382
tissue_ontology_term_id
2 categories
Category Best annotation Cells
UBERON:0000941
-
224248
UBERON:0001783
-
53792
tissue_source
5 categories
Category Best annotation Cells
Baylor College of Medicine Lions Eye Bank
-
144978
Utah Lions Eye Bank, Florida Lions Eye Bank
-
86088
University of Utah
-
24710
Massachusetts General Hospital
-
20308
Georgia Eye Bank
-
1956
tissue_type
1 categories
Category Best annotation Cells
tissue
-
278040
CellID
observation_joinid

Continuous Metadata

13
_Depth
_Detected_Genes
_Mitochondrial_Content
_Protein_Coding_Content
_Ribosomal_Content
_StableID
nCount_RNA
nFeature_RNA
n_genes_by_counts
pct_counts_mt
percent.mt
total_counts
total_counts_mt
Parsing > X_umap 278'040 cells x 35'477 genes
0 filters
General
Main plot
Loading

UMAP Plot

Select metadata from the dropdown to visualize

Click to pick a cell, click and drag to move a label, scroll to zoom

Genes

-
Values from /layers/X

Cell sets Gene sets

0 visible cells
No cell sets yet