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SingleCellRNASeq_GliaMCAoD7 ASAP20 v5
666 cells
M. musculus
Pending Runs (0)
No runs available in this list.
Running Runs (0)
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Success Runs (38)
Module Score #1 - ModuleScore [Seurat]
almost 5 years ago
input_matrix:
Normalization #1 ...
geneset:
1 datasets
geneset_sel:
TEC
n_bins:
24
n_background_genes:
100
seed:
42
Dimension reduction #22 - UMAP
over 5 years ago
input_matrix:
Gene filtering #3...
nber_dims:
3
min_dist:
0.1
n_neighbors:
30
metric:
correlation
Dimension reduction #21 - UMAP
over 5 years ago
input_matrix:
Gene filtering #2...
nber_dims:
3
min_dist:
0.1
n_neighbors:
30
metric:
correlation
Dimension reduction #20 - UMAP
over 5 years ago
input_matrix:
Gene filtering #3...
nber_dims:
2
min_dist:
0.1
n_neighbors:
30
metric:
correlation
Dimension reduction #19 - UMAP
over 5 years ago
input_matrix:
Gene filtering #2...
nber_dims:
2
min_dist:
0.1
n_neighbors:
30
metric:
correlation
Dimension reduction #18 - UMAP
over 5 years ago
input_matrix:
Scaling #1 /layer...
nber_dims:
2
min_dist:
0.4
n_neighbors:
30
metric:
correlation
Gene Enrichment #10 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #9 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #8 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #7 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #6 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #5 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #4 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #3 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #2 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #1 - Fisher's Exact Test
over 5 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
58
adj_method:
fdr
min:
15
max:
500
Differential expression #10 - Wilcoxon [Seurat]
over 5 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
3
group_comp:
2
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #9 - Wilcoxon [Seurat]
over 5 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
3
group_comp:
1
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #8 - Wilcoxon [Seurat]
over 5 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
4
group_comp:
2
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #7 - Wilcoxon [Seurat]
over 5 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
4
group_comp:
1
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
... and 18 more
Failed Runs (0)
No runs available in this list.
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