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Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns
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| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| GSE81547 | Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns. |
Martin EngeEfsun Arda
|
| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| E-GEOD-81547 | Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns |
Downloaded from CELLxGENE.
Project collection
CELLxGENESingle-Cell Analysis of Human Pancreas Reveals Transcriptional Signatures of Aging and Somatic Mutation Patterns
As organisms age, cells accumulate genetic and epigenetic errors that eventually lead to impaired organ function or catastrophic transformation such as cance...
1 project in this collection
Publications
Enge M; Arda HE; Mignardi M; Beausang J; Bottino R; Kim SK; Quake SR PubMed: 28965763
Description
As organisms age, cells accumulate genetic and epigenetic errors that eventually lead to impaired organ function or catastrophic transformation such as cancer. Because aging reflects a stochastic process of increas ing disorder, cells in an organ will be individually affected in different ways, thus rendering bulk analyses of postmitotic adult cells difficult to interpret. Here, we directly measure the effects of aging in human tissue by performing single-cell transcriptome analysis of 2,544 human pancreas cells from eight donors spanning six decades of life. We find that islet endocrine cells from older donors display increased levels of transcriptional noise and potential fate drift. By determining the mutational history of individual cells, we uncover a novel mutational signature in healthy aging endocrine cells. Our results demonstrate the feasibility of using single-cell RNA sequencing (RNA-seq) data from primary cells to derive insights into genetic and transcriptional processes that operate on aging human tissue.
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| LOOM file | Run | Embedding | Created by | Created |
|---|---|---|---|---|
| parsing/output.loom | Parsing #1 | X_tsne | fabrice.david | Aug 13, 2026 |
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