[FCA] Heart (10x, Stringent)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

mbkfrp

Project Name

[FCA] Heart (10x, Stringent)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
14	muscle cell	Mlp84B Act57B fln bt wupA org-1 TpnC4 sls	-	+3 / -0	bbcf.epfl	May 30, 2022
13	indirect flight muscle	Mlp84B Act57B fln bt wupA org-1 TpnC4 sls	-	+3 / -0	bbcf.epfl	May 30, 2022
12	hemocyte	sns Amnionless Muc11A zfh1 mesh Ppn Scp2 grh Hml Hand	-	+3 / -0	bbcf.epfl	May 30, 2022
11	epithelial cell	Ppn grh Hml	-	+3 / -0	bbcf.epfl	May 30, 2022
10	crystal cell	lz Ppn Hml PPO1 PPO2	-	+1 / -0	bbcf.epfl	May 30, 2022
7	adult salivary gland	-	-	+0 / -0	bbcf.epfl	May 30, 2022
4	adult oenocyte	-	-	+0 / -0	bbcf.epfl	May 30, 2022
3	adult heart ventral longitudinal muscle	Mlp84B Act57B lz Ppn fln bt wupA grh Hml PPO1 org-1 trh TpnC4 PPO2 sls	-	+3 / -0	bbcf.epfl	May 30, 2022
2	adult fat body	-	-	+0 / -0	bbcf.epfl	May 30, 2022
1	adult abdominal pericardial cell	-	-	+0 / -0	bbcf.epfl	May 30, 2022
0	adult Malpighian tubule	-	-	+0 / -0	bbcf.epfl	May 30, 2022
96	Elk-positive adult cardiomyocytes	H15 Oct-TyrR Elk	-	+1 / -0	bbcf.epfl	May 30, 2022
88	Tdc1-expressing unknown muscle	Tdc1 bt sls	-	+1 / -0	bbcf.epfl	May 30, 2022
82	ostium	H15 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
39	FGF-positive adult cardiomyocyte	H15 pyr ths	-	+1 / -0	bbcf.epfl	May 30, 2022
37	embryonic/larval fat body	Lsp1alpha Lsp1beta Fbp1 Fbp2	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult ostium	Doc1 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
34	sens-2 Rh50 expressing unknown cluster	sens-2 lab Rh50	-	+1 / -0	bbcf.epfl	May 30, 2022
33	unknown muscle (Alary?)	tn Pkcdelta bt Zasp66 sls	-	+1 / -0	bbcf.epfl	May 30, 2022
32	adult salivary gland	CG12310 Sox21b CG4839 fkh	-	+1 / -0	bbcf.epfl	May 30, 2022
30	unknown cluster of Toll-4 positive cells	CG15550 Toll-4	-	+1 / -0	bbcf.epfl	May 30, 2022
28	Mlp84B expressing unknown muscle cluster	Mlp84B sls	-	+1 / -0	bbcf.epfl	May 30, 2022
26	other immune cells	AttA AttC DptB	-	+1 / -0	bbcf.epfl	May 30, 2022
25	jbug Ppn double-positive unknown cluster	Ppn jbug	-	+1 / -0	bbcf.epfl	May 30, 2022
24	adult pericardial cell	sns pros	-	+1 / -0	bbcf.epfl	May 30, 2022
23	trachea	wat trh	-	+1 / -0	bbcf.epfl	May 30, 2022
22	crystal cell	lz PPO1	-	+1 / -0	bbcf.epfl	May 30, 2022
19	adult fat body	FASN3 FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
18	Salm-positive fatbody	FASN3 FASN2 salm LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
17	Lsd-1 Prat2 expressing adult fat body	Prat2 Lsd-1	-	+1 / -0	bbcf.epfl	May 30, 2022
16	Lsd-1 Prat2 expressing adult fat body	Prat2 Lsd-1	-	+1 / -0	bbcf.epfl	May 30, 2022
15	adult fat body	FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
14	male specific cluster of unknown identity	Got1 GlyS Gnmt TotA MtnE	-	+1 / -0	bbcf.epfl	May 30, 2022
13	adult neuron	Syt1 para	-	+1 / -0	bbcf.epfl	May 30, 2022
12	hemocyte	ct Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
11	Lsd-1 Prat2 expressing adult fat body	Prat2 Lsd-1	-	+1 / -0	bbcf.epfl	May 30, 2022
10	other immune cells	AttA AttC DptB	-	+1 / -0	bbcf.epfl	May 30, 2022
9	adult fat body	FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult fat body	FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
6	ventral layer muscle syncytium	org-1 sls	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult pericardial cell	sns pros	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult fat body	FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
2	hemocyte	ct Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
1	Lsd-1 Prat2 expressing adult fat body	Prat2 Lsd-1	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult fat body	FASN2 LpR1	-	+1 / -0	bbcf.epfl	May 30, 2022
27	FGF-positive cardiomyocytes	H15 pyr ths	-	+1 / -0	bbcf.epfl	May 30, 2022
36	indirect flight muscle	vg fln	-	+1 / -0	bbcf.epfl	May 30, 2022
12	crystal cell	lz PPO1	-	+1 / -0	bbcf.epfl	May 30, 2022
10	sensory neuron	sv Vmat Sox15 pdm3	-	+1 / -0	bbcf.epfl	May 30, 2022
1	trh-negative tracheal cells	wat form3 btsz dpy Fas2 ed	-	+1 / -0	bbcf.epfl	May 30, 2022
9	cardiomyocyte, working adult heart muscle (non-ostia)	tin lbl	-	+1 / -0	bbcf.epfl	May 26, 2022
8	adult tracheal cell	trh	-	+1 / -0	bbcf.epfl	May 26, 2022
6	adult peripheral neuron of the heart	nSyb Syt1	-	+2 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Heart (10x, Stringent) ASAP50 v5

Summary

ArrayExpress Experiment

Details