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Info
Releases
Release notes & changelog
Project types
Available project types and their configurations
Cell ontologies
Ontology catalogs mirrored from legacy ASAP
Cell metadata schema
Cell metadata used by ASAP to annotate single-cell datasets
Cross-references
Identifier types and external database links
Atlases
FCA and HCA reference pages and entry points
Tutorials
Step-by-step guides for new users
File formats
Supported upload and export formats
API documentation
OpenAPI/Swagger reference for JSON endpoints
FAQ
Frequently asked questions about ASAP
Guest Mode
Feedback
Identity
[FCA] Ovary (10x, Stringent)
Activity
Reproducibility
Source repository links
| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| E-MTAB-10519 | The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset |
|
Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein
|
Downloaded from Fly Cell Atlas
Publications
| LOOM file | Run | Embedding | Created by | Created |
|---|---|---|---|---|
| Parsing | Parsing #1 | Embedding_HVG_PC1_PC2 | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_t_SNE | bbcf.epfl | Jun 11, 2021 |
No checkpoints.
No comments.
| Cluster/category | Label | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|---|---|---|---|---|---|---|
| 20 | stretch follicle cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 19 | stalk follicle cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 15 | polar follicle cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 14 | oviduct | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 13 | ovarian sheath muscle |
Mlp84B
bam
Mlc2
Mhc
Cp18
Cp38
nos
Act57B
Vm26Ab
Vm26Aa
vas
Mlp60A
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 8 | escort cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 7 | dorsal appendage forming follicle cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 21 | young germ cell | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 18 | posterior terminal follicle cell ca. St. 5-8 | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 17 | post-mitotic germ cell early 16-cell cyst | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 16 | post-mitotic endocycling nurse cell | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 12 | main body follicle cell ca. until St. 5 | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 11 | germline cell, unknown stage | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 10 | germ cell stage 4 and later | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 9 | follicle stem cell and prefollicle cell |
eya
cas
sick
Wnt4
|
- | +1 / -0 | bbcf.epfl | May 26, 2022 | |
| 6 | choriogenic main body follicle cell and corpus luteum | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 5 | choriogenic main body follicle cell St. 14 | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 4 | choriogenic main body follicle cell St. 12 | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 3 | central main body follicle cell ca. St. 6-8 | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 2 | artefact | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 1 | adult tracheal cell | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 0 | 16-cell germline cyst in germarium region 2a and 2b | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 |
No annotations for this metadata.
| Project key | Metadata name | Cluster/category | Label | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|
No annotations found for this cell set.