[FCA] Wing (10x, Relaxed) ASAP40 v5

17,332 cells D. melanogaster

Parsing

Success
2021-06-11 14:24 Wait 0:08 Run 0:34 (expected 1:21) Max. RAM 2.21TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/Clustering_Leiden_resolution_4.0 1 cell 60 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 5 categories /col_attrs/_Depth 17332 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 33 categories /col_attrs/_StableID 17332 cells 1 row /col_attrs/annotation 1 cell 8 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 103 categories /col_attrs/Clustering_Leiden_resolution_2.0 1 cell 39 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 130 categories /col_attrs/Clustering_Leiden_resolution_1.8 1 cell 38 categories /col_attrs/Clustering_Leiden_resolution_1.0 1 cell 27 categories /col_attrs/Clustering_Annotation 1 cell 8 categories /col_attrs/age 1 cell 1 category /col_attrs/annotation_broad__ontology_id 1 cell 6 categories /col_attrs/fca_id 1 cell 2 categories /col_attrs/S_annotation_broad 1 cell 5 categories /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/sample_id 1 cell 2 categories /col_attrs/Embedding_HVG_t_SNE 17332 cells 2 rows /col_attrs/Embedding_HVG_UMAP 17332 cells 2 rows /col_attrs/ClusterID 1 cell 17 categories /col_attrs/annotation_broad 1 cell 6 categories /col_attrs/dissection_lab 1 cell 1 category /col_attrs/Clustering_Broad_Annotation 1 cell 6 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 8 categories /col_attrs/_Detected_Genes 17332 cells 1 row /col_attrs/_Protein_Coding_Content 17332 cells 1 row /col_attrs/_Mitochondrial_Content 17332 cells 1 row /col_attrs/_Ribosomal_Content 17332 cells 1 row /col_attrs/CellID 17332 cells 1 row /col_attrs/Embedding_SCENIC_AUC_UMAP 17332 cells 2 rows /col_attrs/id 1 cell 2 categories /col_attrs/S_annotation__ontology_id 1 cell 8 categories /col_attrs/S_annotation_broad__ontology_id 1 cell 5 categories /col_attrs/S_annotation 1 cell 8 categories /col_attrs/sex 1 cell 2 categories /col_attrs/batch_id 1 cell 1 category /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 34 categories /col_attrs/n_genes 17332 cells 1 row /col_attrs/Embedding_SCENIC_AUC_t_SNE 17332 cells 2 rows /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 20 categories /col_attrs/Clustering_Leiden_resolution_0.8 1 cell 24 categories /col_attrs/n_counts 17332 cells 1 row /col_attrs/Embedding_HVG_PC1_PC2 17332 cells 2 rows /col_attrs/percent_mito 17332 cells 1 row /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 17 categories /col_attrs/leiden 1 cell 17 categories /col_attrs/tissue 1 cell 1 category /col_attrs/fly_genetics 1 cell 1 category /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/batch 1 cell 2 categories /col_attrs/note 1 cell 1 category /col_attrs/annotation__ontology_id 1 cell 8 categories /col_attrs/Clustering_Leiden_resolution_0.4__default__400_ 1 cell 17 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 31 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 78 categories /col_attrs/scrublet__doublet_scores 1 cell 167 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 17 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 17 categories
Global Metadata