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Info
Releases
Release notes & changelog
Project types
Available project types and their configurations
Cell ontologies
Ontology catalogs mirrored from legacy ASAP
Cell metadata schema
Cell metadata used by ASAP to annotate single-cell datasets
Cross-references
Identifier types and external database links
Tutorials
Step-by-step guides for new users
File formats
Supported upload and export formats
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Frequently asked questions about ASAP
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Identity
[FCA] Malpighian tubule (10x, Stringent)
Activity
Reproducibility
Source repository links
| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| E-MTAB-10519 | The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset |
|
Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein
|
Downloaded from Fly Cell Atlas
Publications
| LOOM file | Run | Embedding | Created by | Created |
|---|---|---|---|---|
| Parsing | Parsing #1 | Embedding_HVG_PC1_PC2 | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_t_SNE | bbcf.epfl | Jun 11, 2021 |
No checkpoints.
No comments.
| Cluster/category | Label | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|---|---|---|---|---|---|---|
| 17 | visceral muscle |
Mhc
CG45076
Mf
up
bt
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 12 | adult salivary gland |
sage
sens
5-HT7
yellow-d
5-HT2A
CG33109
LysP
Sox21b
pio
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 11 | adult renal stem cell |
Sox21a
Dl
N
zfh1
vkg
Ppn
Hml
Pxn
esg
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 10 | adult oenocyte | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 7 | adult hindgut | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 6 | adult fat body | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 5 | adult Malpighian tubule stellate cell of main segment | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 4 | adult Malpighian tubule principal cell of lower ureter | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 3 | adult Malpighian tubule principal cell of lower segment | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 2 | adult Malpighian tubule principal cell of initial segment | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 1 | adult Malpighian tubule principal cell | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 0 | adult Malpighian tubule bar-shaped cell of initial segment | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 16 | principal cell* | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 15 | posterior midgut* | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 13 | adult tracheal cell | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 9 | adult midgut* | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 8 | adult hindgut* | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 14 | artefact |
zfh1
vkg
Ppn
Hml
Pxn
|
- | +2 / -0 | bbcf.epfl | May 26, 2022 |
No annotations for this metadata.
| Project key | Metadata name | Cluster/category | Label | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|
No annotations found for this cell set.